Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PAGN1 |
| Gene Symbol Synonym | OsPAGN1, OsRING290, RING290 |
| CGSNL Gene Name | PLANT ARCHITECTURE AND GRAIN NUMBER 1 |
| Gene Name Synonym | PLANT ARCHITECTURE and GRAIN NUMBER 1, RING-type E3 ubiquitin ligase 290 |
| Protein Name | |
| Allele | pagn1 |
| Chromosome No. | 7 |
| Explanation | TO:0000949: seedling growth and development trait. |
| Trait Class |
Vegetative organ - Culm
Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK288211
|
| MSU ID |
LOC_Os07g23970.1
|
| RAP ID |
Os07g0421800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Yan P., Zhu Y., Wang Y., Ma F., Lan D., Niu F., Dong S., Zhang X., Hu J., Liu S., Guo T., Xin X., Zhang S., Yang J., Cao L., Luo X.
Int J Mol Sci 2022 23(2) A New RING Finger Protein, <i>PLANT ARCHITECTURE</i> and <i>GRAIN NUMBER</i> 1, Affects Plant Architecture and grain yield in Rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
unidimensional cell growth( GO:0009826 )
cytoplasm( GO:0005737 ) seed development( GO:0048316 ) primary metabolic process( GO:0044238 ) cellular macromolecule metabolic process( GO:0044260 ) cytokinin mediated signaling( GO:0009736 ) |
| Trait Ontology |
grain yield( TO:0000396 )
filled grain number( TO:0000447 ) plant height( TO:0000207 ) tiller number( TO:0000346 ) seed development trait( TO:0000653 ) growth and development trait( TO:0000357 ) cytokinin content( TO:0002660 ) grain number( TO:0002759 ) primary branch number( TO:0000547 ) |
| Plant Ontology |
seed development stage( PO:0001170 )
root( PO:0009005 ) leaf( PO:0025034 ) stem( PO:0009047 ) anther( PO:0009066 ) seedling development stage( PO:0007131 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Feb 1, 2023 | |
