Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | TPR46 |
| Gene Symbol Synonym | OsTPR046, TPR046, OsTPR46 |
| CGSNL Gene Name | TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 46 |
| Gene Name Synonym | Tetratricopeptide repeat domain containing protein 46 |
| Protein Name | TETRATRICOPEPTIDE REPEAT DOMAIN CONTAINING PROTEIN 46 |
| Allele | |
| Chromosome No. | 2 |
| Explanation | belonging to the ANK-TPR subfamily. O. rufipogon ORUFI02G18040. PO:0030123: panicle inflorescence. |
| Trait Class |
Reproductive organ - panicle
Seed - Physiological traits - Longevity Tolerance and resistance - Stress tolerance Character as QTL - Grain quality Character as QTL - Yield and productivity Reproductive organ - Panicle, Mode of branching |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os02g29190.1
|
| RAP ID |
Os02g0494000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Li F., Ye H., Wang Y., Zhou J., Zhang G., Liu X., Lu X., Wang F., Chen Q., Chen G., Xiao Y., Tang W., Deng H.
Plants (Basel) 2024 13(7) Transcriptomic Profiling of Two Rice Thermo-Sensitive Genic Male Sterile Lines with Contrasting Seed Storability after Artificial Accelerated Aging Treatment.
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Khong G.N., Le N.T., Pham M.T., Adam H., Gauron C., Le H.Q., Pham D.T., Colonges K., Pham X.H., Do V.N., Lebrun M., Jouannic S.
PLoS Genet. 2021 17(6) e1009594 A cluster of Ankyrin and Ankyrin-TPR repeat genes is associated with panicle branching diversity in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
inflorescence development( GO:0010229 )
maintenance of inflorescence meristem identity( GO:0010077 ) inflorescence morphogenesis( GO:0048281 ) response to heat( GO:0009408 ) response to humidity( GO:0009270 ) |
| Trait Ontology |
inflorescence development trait( TO:0000621 )
inflorescence branching( TO:0000050 ) secondary branch number( TO:0000557 ) yield trait( TO:0000371 ) secondary branching of inflorescence( TO:0000142 ) heat tolerance( TO:0000259 ) humidity related trait( TO:0000441 ) seed viability( TO:0000345 ) seed longevity( TO:0000435 ) vigor related trait( TO:0000250 ) percent germination( TO:0010001 ) |
| Plant Ontology |
inflorescence( PO:0009049 )
inflorescence development stage( PO:0001083 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Sep 12, 2024 | |
