Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol STH1
Gene Symbol Synonym D14L2, OsD14L2, D14L2a, OsD14L2a, OsSTH1
CGSNL Gene Name SALT TOLERANCE AND HEADING DATE 1
Gene Name Synonym D14-like 2, Dwarf14-like2a, Salt Tolerance and Heading Date 1
Protein Name D14-LIKE PROTEIN 2
Allele STH1-HP46, STH1-HJX74
Chromosome No. 5
Explanation a homolog of D14. a hydrolase with an a/b domain. GO:0080167: response to karrikin. TO:0000757: hypocotyl morphology trait. GO:0036377: arbuscular mycorrhizal association. GO:1901600: strigolactone metabolic process. GO:1902347: response to strigolactone. GO:2000028: regulation of photoperiodism, flowering. GO:1901001: negative regulation of response to salt stress. TO:0000975: grain width. GO:2000377: regulation of reactive oxygen species metabolic process.
Trait Class Vegetative organ - Culm
Reproductive organ - Heading date
Reproductive organ - Inflorescence
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK067788
MSU ID LOC_Os05g51240.1
RAP ID Os05g0590300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Mashiguchi K., Morita R., Tanaka K., Kodama K., Kameoka H., Kyozuka J., Seto Y., Yamaguchi S.
Plant Cell Physiol. 2023  64(9)  1066-1078
Activation of Strigolactone Biosynthesis by the DWARF14-LIKE/KARRIKIN-INSENSITIVE2 Pathway in Mycorrhizal Angiosperms, but Not in Arabidopsis, a Non-mycorrhizal Plant.
Xiang Y.H., Yu J.J., Liao B., Shan J.X., Ye W.W., Dong N.Q., Guo T., Kan Y., Zhang H., Yang Y.B., Li Y.C., Zhao H.Y., Yu H.X., Lu Z.Q., Lin H.X.
Mol Plant 2022   
An alpha/beta hydrolase family member negatively regulates salt tolerance but promotes flowering through three distinct functions in rice.
Sisaphaithong T., Yanase M., Mano T., Tanabe S., Minami E., Tanaka A., Hata S., Kobae Y.
Plant Signal Behav 2021  16(12)  2009998
Localized expression of the <i>Dwarf14-like2a</i> gene in rice roots on infection of arbuscular mycorrhizal fungus and hydrolysis of <i>rac</i>-GR24 by the encoded protein.
Zheng J., Hong K., Zeng L., Wang L., Kang S., Qu M., Dai J., Zou L., Zhu L., Tang Z., Meng X., Wang B., Hu J., Zeng D., Zhao Y., Cui P., Wang Q., Qian Q., Wang Y., Li J., Xiong G.
Plant Cell 2020  32(9)  2780-2805
Karrikin Signaling Acts Parallel to and Additively with Strigolactone Signaling to Regulate Rice Mesocotyl Elongation in Darkness.
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of hydrogen peroxide metabolic process( GO:0010310 )
negative regulation of short-day photoperiodism, flowering( GO:0048577 )
short-day photoperiodism( GO:0048572 )
photoperiodism( GO:0009648 )
hydrolase activity( GO:0016787 )
nucleus( GO:0005634 )
photoperiodism, flowering( GO:0048573 )
response to salt stress( GO:0009651 )
fatty acid homeostasis( GO:0055089 )
fatty acid catabolic process( GO:0009062 )
regulation of fatty acid metabolic process( GO:0019217 )
symbiosis, encompassing mutualism through parasitism( GO:0044403 )
response to symbiotic fungus( GO:0009610 )
Trait Ontology plant growth hormone sensitivity( TO:0000401 )
salt tolerance( TO:0006001 )
days to heading( TO:0000137 )
flowering time( TO:0002616 )
photoperiod sensitivity( TO:0000229 )
grain yield( TO:0000396 )
relative yield( TO:0000153 )
fat and essential oil content( TO:0000604 )
panicle length( TO:0000040 )
primary branch number( TO:0000547 )
grain number( TO:0002759 )
grain length( TO:0000734 )
grain width( TO:0000402 )
1000-seed weight( TO:0000382 )
relative plant height( TO:0001034 )
sodium content( TO:0000608 )
hydrogen peroxide content( TO:0000605 )
Plant Ontology root epidermal cell( PO:0025164 )
root cortex( PO:0000258 )
Related Strains
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Phenotype images
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Last updated
Mar 11, 2025

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