Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PPR16 |
| Gene Symbol Synonym | OsPPR16 |
| CGSNL Gene Name | PENTATRICOPEPTIDE REPEAT PROTEIN 16 |
| Gene Name Synonym | pentatricopeptide repeat protein 16 |
| Protein Name | PENTATRICOPEPTIDE REPEAT PROTEIN 16 |
| Allele | osppr16, osppr16d, osppr16s |
| Chromosome No. | 6 |
| Explanation | GO:1900871: chloroplast mRNA modification. |
| Trait Class |
Vegetative organ - Leaf
Coloration - Chlorophyll |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK103359
|
| MSU ID |
LOC_Os06g02200.1
|
| RAP ID |
Os06g0112000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Huang W., Zhang Y., Shen L., Fang Q., Liu Q., Gong C., Zhang C., Zhou Y., Mao C., Zhu Y., Zhang J., Chen H., Zhang Y., Lin Y., Bock R., Zhou F.
New Phytol. 2020 Accumulation of the RNA polymerase subunit RpoB depends on RNA editing by OsPPR16 and affects chloroplast development during early leaf development in rice.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
chloroplast organization( GO:0009658 )
mRNA modification( GO:0016556 ) chloroplast( GO:0009507 ) chlorophyll biosynthetic process( GO:0015995 ) |
| Trait Ontology |
chloroplast development trait( TO:0002715 )
leaf color( TO:0000326 ) chlorophyll-a content( TO:0000293 ) chlorophyll-b content( TO:0000295 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Sep 23, 2020 | |
