Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | NPF5.16 |
| Gene Symbol Synonym | PTR, OsNPF5.16 |
| CGSNL Gene Name | NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 5.16 |
| Gene Name Synonym | peptide transporter, nitrate or peptide transporter family 5.16, NRT1/PTR family 5.16 |
| Protein Name | NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 5.16 |
| Allele | |
| Chromosome No. | 1 |
| Explanation | peptide transporter (PTR) gene family. GO:0035673: oligopeptide transmembrane transporter activity. GO:1904680: peptide transmembrane transporter activity. TO:0020098: nitrate sensitivity. TO:0000949: seedling growth and development trait. GO:1900140: regulation of seedling development. GO:0071705: nitrogen compound transport. TO:0020094: nitrate content. TO:0020093: nitrogen content. TO:0003001: stem dry weight. GO:2000280: regulation of root development. |
| Trait Class |
Vegetative organ - Root
Vegetative organ - Culm Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK068086
AK066692 |
| MSU ID |
LOC_Os01g65200.1
LOC_Os01g65200.2 LOC_Os01g65200.3 |
| RAP ID |
Os01g0872500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Mohanty S., Das S., Panda D., Choudhury N.K., Mishra B., Jena R.K., Sah R.P., Chandrappa A.K., Basavantraya Navadagi D., Raj K R R., Kumar A., Pradhan S.K., Samantaray S., Baig M.J., Behera L.
Biomolecules 2025 15(10) Identification of Novel Quantitative Trait Loci and Candidate Genes Associated with Grain Yield and Related Traits Under Low-Light Stress Conditions in Rice.
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Wang J., Wan R., Nie H., Xue S., Fang Z.
The Crop Journal 2022 10 397-406 OsNPF5.16, a nitrate transporter gene with natural variation, is essential for rice growth and yield
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Yang X., Xia X., Zeng Y., Nong B., Zhang Z., Wu Y., Tian Q., Zeng W., Gao J., Zhou W., Liang H., Li D., Deng G.
BMC Plant Biol. 2020 20(1) 193 Genome-wide identification of the peptide transporter family in rice and analysis of the PTR expression modulation in two near-isogenic lines with different nitrogen use efficiency.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
transmembrane transporter activity( GO:0022857 )
peptide:hydrogen symporter activity( GO:0015333 ) root development( GO:0048364 ) response to acidity( GO:0010447 ) nitrate assimilation( GO:0042128 ) response to nitrate( GO:0010167 ) plasma membrane( GO:0005886 ) nitrate transmembrane transporter activity( GO:0015112 ) response to low light intensity stimulus( GO:0009645 ) |
| Trait Ontology |
yield trait( TO:0000371 )
growth and development trait( TO:0000357 ) acid sensitivity( TO:0000479 ) plant dry weight( TO:0000352 ) tiller number( TO:0000346 ) total biomass yield( TO:0000457 ) grain yield( TO:0000396 ) cytokinin content( TO:0002660 ) grain yield per plant( TO:0000449 ) filled grain number( TO:0000447 ) root number( TO:0000084 ) root length( TO:0000227 ) light intensity sensitivity( TO:0000460 ) |
| Plant Ontology |
root( PO:0009005 )
leaf sheath( PO:0020104 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Dec 24, 2025 | |
