Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CAF1
Gene Symbol Synonym OsCAF1
CGSNL Gene Name CRS2-ASSOCIATED FACTOR 1
Gene Name Synonym CRS2-associated factor 1
Protein Name CRS2-ASSOCIATED FACTOR 1
Allele oscaf1
Chromosome No. 1
Explanation Q5VMQ5. the ortholog of ZmCAF1 in rice. a chloroplast RNA splicing and ribosome maturation (CRM) domain protein.
Trait Class Vegetative organ - Leaf
Coloration - Chlorophyll
Coloration - Others
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK065221
MSU ID LOC_Os01g31110.1
RAP ID Os01g0495900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang Q., Shen L., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Biomolecules 2020  10(2) 
Characterization of the CRM Gene Family and Elucidating the Function of OsCFM2 in Rice.
Zhang Q., Shen L., Wang Z., Hu G., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Int J Mol Sci 2019  20(18) 
OsCAF1, a CRM Domain Containing Protein, Influences Chloroplast Development.
DB Reference
Gramene ID -
Ontologies
Gene Ontology chloroplast stroma( GO:0009570 )
mRNA processing( GO:0006397 )
Group II intron splicing( GO:0000373 )
RNA binding( GO:0003723 )
chloroplast( GO:0009507 )
chloroplast organization( GO:0009658 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
Trait Ontology leaf color( TO:0000326 )
chloroplast development trait( TO:0002715 )
photosynthetic ability( TO:0000316 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
carotenoid content( TO:0000496 )
hydrogen peroxide content( TO:0000605 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
Plant Ontology leaf( PO:0025034 )
stem( PO:0009047 )
spikelet( PO:0009051 )
Related Strains
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Phenotype images
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Last updated
Jun 25, 2020

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