Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | DSL1 |
| Gene Symbol Synonym | OsDSL1, OsHDA711, HDA711, OsHDA9, HDA9 |
| CGSNL Gene Name | DWARF WITH SLENDER LEAF1 |
| Gene Name Synonym | dwarf with slender leaf 1, Histone Deacetylase 711 |
| Protein Name | HISTONE DEACETYLASE 711 |
| Allele | dsl1 |
| Chromosome No. | 4 |
| Explanation | GO:0080186: developmental vegetative growth. TO:0020109: vascular bundle development trait. RPD/HDA1 family. OsHDA9 in Niu et al. 2022. BGIOSGA016344 (indica). |
| Trait Class |
Biochemical character
Vegetative organ - Leaf Vegetative organ - Culm Reproductive organ - panicle Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK066667
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| MSU ID |
LOC_Os04g33480.1
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| RAP ID |
Os04g0409600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Huang Y., Liu J., Cheng L., Xu D., Liu S., Hu H., Ling Y., Yang R., Zhang Y.
Plants (Basel) 2024 13(17) Genome-Wide Analysis of the Histone Modification Gene (<i>HM</i>) Family and Expression Investigation during Anther Development in Rice (<i>Oryza sativa</i> L.).
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Niu Y., Bai J., Liu X., Zhang H., Bao J., Zhao W., Hou Y., Deng X., Yang C., Guo L., Geng Z., Xie H., Wu H., Shen M., Lou X., Tang W., Liu X., Sun D., Cao X., Zheng S.
Proc. Natl. Acad. Sci. U.S.A. 2022 119(45) e2206846119 HISTONE DEACETYLASE 9 transduces heat signal in plant cells.
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Hou J., Ren R., Xiao H., Chen Z., Yu J., Zhang H., Shi Q., Hou H., He S., Li L.
Planta 2021 253(3) 72 Characteristic and evolution of HAT and HDAC genes in Gramineae genomes and their expression analysis under diverse stress in Oryza sativa.
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Fumika Clara Kubo, Yasui Y., Ohmori Y., Kumamaru T., Tanaka W., Hiro-Yuki Hirano
Plant Cell Physiol. 2019 DWARF WITH SLENDER LEAF1 encoding a histone deacetylase plays diverse roles in rice development.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
histone deacetylase complex( GO:0000118 )
positive regulation of transcription from RNA polymerase II promoter( GO:0045944 ) histone H4 deacetylation( GO:0070933 ) histone H3 deacetylation( GO:0070932 ) metal ion binding( GO:0046872 ) response to auxin stimulus( GO:0009733 ) response to cold( GO:0009409 ) response to salt stress( GO:0009651 ) response to water deprivation( GO:0009414 ) positive regulation of cell division( GO:0051781 ) inflorescence development( GO:0010229 ) reproductive structure development( GO:0048608 ) histone deacetylase activity( GO:0004407 ) response to heat( GO:0009408 ) |
| Trait Ontology |
plant height( TO:0000207 )
leaf length( TO:0000135 ) leaf width( TO:0000370 ) vascular bundle number( TO:0000472 ) internode length( TO:0000145 ) inflorescence development trait( TO:0000621 ) drought tolerance( TO:0000276 ) salt tolerance( TO:0006001 ) cold tolerance( TO:0000303 ) auxin sensitivity( TO:0000163 ) heat tolerance( TO:0000259 ) |
| Plant Ontology |
inflorescence development stage( PO:0001083 )
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| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Jan 14, 2025 | |
