Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SLC2
Gene Symbol Synonym OsSLC2, OsACO, ACO
CGSNL Gene Name SLENDER AND CRINKLY LEAF 2
Gene Name Synonym
Protein Name
Allele slc2, slc2-27, slc2-61, slc2-62, osaco
Chromosome No. 9
Explanation Q651B6 . PO:0025570: vascular leaf development stage. TO:0000748: leaf morphology trait. TO:0000905: seed yield trait.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Seed
Seed - Physiological traits - Dormancy
Character as QTL - Germination
Expression
Sequence/Locus
cDNA Accession No. AK064211
MSU ID LOC_Os09g39720.1
RAP ID Os09g0570800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yu J., Mao C., Zhong Q., Yao X., Li P., Liu C., Ming F.
Front Plant Sci 2021  12  699303
OsNAC2 Is Involved in Multiple Hormonal Pathways to Mediate Germination of Rice Seeds and Establishment of Seedling.
Liu X., Wen-Jing Cai, Yin X., Yang D., Dong T., Yu-Qi Feng, Wu Y.
J. Exp. Bot. 2019   
Two dioxygenases, slc1 and SLC2, play essential roles in shoot development of rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology dioxygenase activity( GO:0051213 )
metal ion binding( GO:0046872 )
shoot development( GO:0048367 )
salicylic acid biosynthetic process( GO:0009697 )
root development( GO:0048364 )
leaf development( GO:0048366 )
seed development( GO:0048316 )
seed germination( GO:0009845 )
Trait Ontology root length( TO:0000227 )
plant height( TO:0000207 )
leaf width( TO:0000370 )
leaf number( TO:0000241 )
leaf development trait( TO:0000655 )
Plant Ontology shoot system development stage( PO:0025527 )
4 root elongation stage( PO:0001031 )
seed development stage( PO:0001170 )
0 seed germination stage( PO:0007057 )
coleoptile emergence stage( PO:0007045 )
Related Strains
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Phenotype images
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Last updated
Mar 4, 2022

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