Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | ALT1 |
| Gene Symbol Synonym | OsDLN22, DLN22, CHR706, OsCHR706, OsALT1, OsRING431, RING431 |
| CGSNL Gene Name | ALKALINE TOLERANCE 1 |
| Gene Name Synonym | DLN repressor 22, DLN motif protein 22, chromatin remodeling factor 706, alkaline tolerance 1, RING-type E3 ubiquitin ligase 431 |
| Protein Name | DLN REPRESSOR 22 |
| Allele | alt1 |
| Chromosome No. | 1 |
| Explanation | GO:0140658: ATP-dependent chromatin remodeler activity. |
| Trait Class |
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK072085
AK072094 |
| MSU ID |
LOC_Os01g57110.1
LOC_Os01g57110.2 |
| RAP ID |
Os01g0779400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Guo M., Zhao H., He Z., Zhang W., She Z., Mohammadi M.A., Shi C., Yan M., Tian D., Qin Y.
Front Plant Sci 2022 13 910663 Comparative Expression Profiling of Snf2 Family Genes During Reproductive Development and Stress Responses in Rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7) Analysis of Rice Proteins with DLN repressor Motif/S.
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Guo M., Wang R., Wang J., Hua K., Wang Y., Liu X., Yao S.
PLoS ONE 2014 9(12) e112515 ALT1, a Snf2 Family Chromatin Remodeling ATPase, Negatively Regulates Alkaline Tolerance through Enhanced Defense against Oxidative Stress in Rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
ATP binding( GO:0005524 )
primary metabolic process( GO:0044238 ) cellular macromolecule metabolic process( GO:0044260 ) DNA repair( GO:0006281 ) metal ion binding( GO:0046872 ) DNA-dependent ATPase activity( GO:0008094 ) nucleus( GO:0005634 ) defense response to fungus( GO:0050832 ) response to water deprivation( GO:0009414 ) response to salt stress( GO:0009651 ) response to alkalinity( GO:0010446 ) response to oxidative stress( GO:0006979 ) |
| Trait Ontology |
salt tolerance( TO:0006001 )
blast disease( TO:0000074 ) drought tolerance( TO:0000276 ) alkali sensitivity( TO:0000481 ) oxidative stress( TO:0002657 ) hydrogen peroxide content( TO:0000605 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Feb 1, 2023 | |
