Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | DSNP1 |
| Gene Symbol Synonym | OsCLR1, CLR1, OsDSNP1, OsRING318, RING318, OsC3HC4_067, C3HC4_067 |
| CGSNL Gene Name | DESYNAPSIS 1 |
| Gene Name Synonym | cytoplasmic-localized RING finger protein 1, cytosol-localized RING finger protein 1, DESYNAPSIS1, RING-type E3 ubiquitin ligase 318, C3HC4-type RING zinc finger protein 067 |
| Protein Name | CYTOPLASMIC-LOCALIZED RING FINGER PROTEIN 1 |
| Allele | dsnp1 |
| Chromosome No. | 6 |
| Explanation | GO:0061630: ubiquitin protein ligase activity. GO:1901002: positive regulation of response to salt stress. GO:1902584: positive regulation of response to water deprivation. GO:1905088: positive regulation of synaptonemal complex assembly. GO:0035825: homologous recombination. |
| Trait Class |
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility Reproductive organ - Pollination, fertilization, fertility - Female sterility Reproductive organ - Pollination, fertilization, fertility - Meiosis Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK108505
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| MSU ID |
LOC_Os06g42700.1
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| RAP ID |
Os06g0633500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Chen K., Wang S., Xu X., Zheng X., Wu H., Huang L., Dai L., Zhan C., Zeng D., Fu L.
Plants (Basel) 2025 14(15) Genome-Wide Identification, Characterization, and Comparison of <i>C3HC4</i> Family Genes in salt tolerance Between Barley and Rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Ren L., Zhao T., Zhao Y., Du G., Yang S., Mu N., Tang D., Shen Y., Li Y., Cheng Z.
Cell Rep 2021 37(5) 109941 The E3 ubiquitin ligase DESYNAPSIS1 regulates synapsis and recombination in rice meiosis.
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Park Y.C., Choi S.Y., Kim J.H., Jang C.S.
Plant Cell Physiol. 2019 Molecular functions of rice cytosol-localized RING finger protein 1 in response to salt and drought and comparative analysis of its grass orthologs.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 ) cytosol( GO:0005829 ) abscisic acid mediated signaling( GO:0009738 ) response to abscisic acid stimulus( GO:0009737 ) synaptonemal complex assembly( GO:0007130 ) meiotic cell cycle( GO:0051321 ) synapsis( GO:0007129 ) zinc ion binding( GO:0008270 ) protein ubiquitination( GO:0016567 ) |
| Trait Ontology |
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 ) germination rate( TO:0000430 ) male sterility( TO:0000437 ) female sterility( TO:0000358 ) pollen abortion type( TO:0000218 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Dec 5, 2025 | |
