Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CD1
Gene Symbol Synonym OsCd1
CGSNL Gene Name _
Gene Name Synonym
Protein Name
Allele
Chromosome No. 3
Explanation TO:0020096: mineral and ion transport trait. TO:0006059: cadmium content trait.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK065394
AK060853
MSU ID LOC_Os03g02380.1
LOC_Os03g02380.2
RAP ID Os03g0114800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Lu W.C., Zheng X.L., Xiao Y.T., Sun Z.F., Tang Z., Zhao F.J., Huang X.Y.
Int J Mol Sci 2025  26(19) 
Spatiotemporal Transcriptome Profiling Reveals Nutrient Transport Dynamics in Rice Nodes and Roots During Reproductive Development.
Zhang J., Zhu Y., Yu L., Yang M., Zou X., Yin C., Lin Y.
Cells 2022  11(3) 
Research Advances in Cadmium Uptake, Transport and Resistance in Rice (<i>Oryza sativa</i> L.).
Yan H., Xu W., Xie J., Gao Y., Wu L., Sun L., Feng L., Chen X., Zhang T., Dai C., Li T., Lin X., Zhang Z., Wang X., Li F., Zhu X., Li J., Li Z., Chen C., Ma M., Zhang H., He Z.
Nat Commun 2019  10(1)  2562
Variation of a major facilitator superfamily gene contributes to differential cadmium accumulation between rice subspecies.
DB Reference
Gramene ID -
Ontologies
Gene Ontology integral to membrane( GO:0016021 )
molybdate ion transmembrane transporter activity( GO:0015098 )
cadmium ion transport( GO:0015691 )
plasma membrane( GO:0005886 )
Trait Ontology -
Plant Ontology exodermis( PO:0005772 )
root( PO:0009005 )
root cortex( PO:0000258 )
root endodermis( PO:0005059 )
root stele( PO:0020124 )
root parenchyma( PO:0025095 )
seed development stage( PO:0001170 )
seed maturation stage( PO:0007632 )
endosperm development stage( PO:0007633 )
Related Strains
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Phenotype images
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Last updated
Dec 23, 2025

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