Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HAN1 |
| Gene Symbol Synonym | OsHAN1, OsCYP94B4, CYP94B4 |
| CGSNL Gene Name | CHILLING 1 |
| Gene Name Synonym | Cytochrome P450 94B4, CHILLING TOLERANCE 1 |
| Protein Name | CYTOCHROME P450 94B4 |
| Allele | HAN102428, HAN1Teqing, han1deltaMYB, OsHAN1-CAS4, OsHAN1-CAS15, HAN1-Cas9-1 |
| Chromosome No. | 11 |
| Explanation | CT835686. rice ortholog of AtCYP94B3. "han" termed "chilling" in Chinese (Mao et al. 2019). GO:2000022: regulation of jasmonic acid mediated signaling pathway. TO:0000993: cellulose content. GO:0140426: PAMP-triggered immunity signalling pathway. |
| Trait Class |
Biochemical character
Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance Character as QTL - Plant growth activity Reproductive organ - Spikelet, flower, glume, awn |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os11g29290.1
|
| RAP ID |
Os11g0483000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Wang M., Zhu X., Huang Z., Chen M., Xu P., Liao S., Zhao Y., Gao Y., He J., Luo Y., Chen H., Wei X., Nie S., Dong J., Zhu L., Zhuang C., Zhao J., Liu Z., Zhou H.
Plant Biotechnol. J. 2024 22(8) 2267-2281 Controlling diurnal flower-opening time by manipulating the jasmonate pathway accelerates development of indica-japonica hybrid rice breeding.
|
|
|
Zhao Q., Liu R., Zhou Q., Ye J., Meng F., Liu J., Yang C.
Plant Physiol. 2023 192(2) 1621-1637 Calcium-binding protein OsANN1 regulates rice blast disease resistance by inactivating jasmonic acid signaling.
|
|
|
Rehman M., Kundu B., Regon P., Tanti B.
3 Biotech 2023 13(12) 422 Biochemical and molecular properties of Boro rice (<i>Oryza sativa</i> L.) cultivars under abiotic stresses.
|
|
|
Jiang J., Yang G., Xin Y., Wang Z., Yan W., Chen Z., Tang X., Xia J.
Genes (Basel) 2021 12(5) Overexpression of <i>OsMed16</i> Inhibits the Growth of Rice and Causes Spontaneous Cell Death.
|
|
|
Mao D., Xin Y., Tan Y., Hu X., Bai J., Liu Z.Y., Yu Y., Li L., Peng C., Fan T., Zhu Y., Guo Y.L., Wang S., Lu D., Xing Y., Yuan L., Chen C.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(9) 3494-3501 Natural variation in the <i>HAN1</i> gene confers chilling tolerance in rice and allowed adaptation to a temperate climate.
|
|
|
Hazman M., Martin Sühnel, Sandra Schäfer, Zumsteg J., Agnès Lesot, Fréderic Beltran, Marquis V., Herrgott L., Miesch L., Riemann M., Heitz T.
Rice (N Y) 2019 12(1) 45 Characterization of Jasmonoyl-Isoleucine (JA-Ile) Hormonal Catabolic Pathways in Rice upon Wounding and Salt Stress.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen( GO:0016705 )
endoplasmic reticulum( GO:0005783 ) jasmonic acid mediated signaling pathway( GO:0009867 ) response to cold( GO:0009409 ) iron ion binding( GO:0005506 ) response to wounding( GO:0009611 ) heme binding( GO:0020037 ) plant-type cell wall loosening( GO:0009828 ) circadian rhythm( GO:0007623 ) plant-type cell wall cellulose metabolic process( GO:0052541 ) respiratory burst during defense response( GO:0002679 ) response to chitin( GO:0010200 ) response to molecule of bacterial origin( GO:0002237 ) response to molecule of fungal origin( GO:0002238 ) |
| Trait Ontology |
cold tolerance( TO:0000303 )
flowering time( TO:0002616 ) jasmonic acid content( TO:0002668 ) lodicule anatomy and morphology trait( TO:0006009 ) total soluble sugar content( TO:0000340 ) filled grain number( TO:0000447 ) growth and development trait( TO:0000357 ) blast disease( TO:0000074 ) bacterial blight disease resistance( TO:0000175 ) leaf sheath length( TO:0002689 ) plant height( TO:0000207 ) |
| Plant Ontology |
whole plant( PO:0000003 )
flowering stage( PO:0007616 ) lodicule( PO:0009036 ) lodicule differentiation and expansion stage( PO:0001077 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Mar 8, 2025 | |
