Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PMS3
Gene Symbol Synonym pms3, LDMAR
CGSNL Gene Name PHOTOPERIOD SENSITIVE GENIC MALE STERILITY 3
Gene Name Synonym photoperiod-sensitive genic male sterility3, long-day-specific male-fertility-associated RNA
Protein Name
Allele
Chromosome No. 12
Explanation Male sterile under long-day conditions and fertile under short-day conditions. Located between RFLP markers R2708 and C751/RZ261 on chromosome 12. JQ317784, JQ317784.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Male sterility
Expression
Sequence/Locus
cDNA Accession No. AK100176
AK071577
AK111270
MSU ID LOC_Os12g36030.1
LOC_Os12g36030.2
LOC_Os12g36030.3
RAP ID Os12g0545900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Ding J., Lu Q., Ouyang Y., Mao H., Zhang P., Yao J., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2012  109(7)  2654-9
A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice.
Lu Q, Li XH, Guo D, Xu CG, Zhang Q.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2005  273(6)  507-511
Localization of pms3, a gene for photoperiod-sensitive genic male sterility, to a 28.4-kb DNA fragment.
Mei, M.H., X.K. Dai, C.G. Xu and Qifa Zhang
Crop Sci. 1999  39  1711-1715
Mapping and genetic analysis of the genes for photoperiod-sensitive genic male sterility in rice using the original mutant Nongken 58S.
DB Reference
Gramene ID -
Ontologies
Gene Ontology photoperiodism( GO:0009648 )
multicellular organismal development( GO:0007275 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 10, 2012

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