Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GA3OX1
Gene Symbol Synonym OsGA3ox1, GA3ox1, OsGA3OX1
Gene Name Synonym GA 3beta-hydroxylase1, GA 3beta-hydroxylase 1, Gibberellin(GA)-3 beta-hydroxylase-1
Allele osga3ox1, osga3ox1-1,osga3ox1-2, osga3ox1-3, osga3ox1-4, osga3ox1-10, osga3ox1-19
Chromosome No. 5
Explanation This gene controls some steps of gibberellin synthesis. The defect on this process causes dwarfism of rice. This gene is located on chromosome 5 at 33.6cM. AC144738. rice ortholog of Arabidopsis GA4.
Trait Class Biochemical character
Character as QTL - Yield and productivity
cDNA Accession No. AK120915
MSU ID LOC_Os05g08540.1
RAP ID Os05g0178100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Hsieh K.T., Wu C.C., Lee S.J., Chen Y.H., Shiue S.Y., Liao Y.C., Liu S.H., Wang I.W., Tseng C.S., Li W.H., Wang C.S., Chen L.J.
PLoS ONE 2023  18(10)  e0292400
Rice GA3ox1 modulates pollen starch granule accumulation and pollen wall development.
Song G., Son S., Nam S., Suh E.J., Lee S.I., Park S.R.
Int J Mol Sci 2023  24(7) 
OsWRKY114 Is a Player in Rice Immunity against <i>Fusarium fujikuroi</i>.
Mei E., Tang J., He M., Liu Z., Tian X., Bu Q.
Int J Mol Sci 2022  23(22) 
OsMKKK70 Negatively Regulates cold tolerance at Booting Stage in Rice.
Dong S., Dong X., Han X., Zhang F., Zhu Y., Xin X., Wang Y., Hu Y., Yuan D., Wang J., Huang Z., Niu F., Hu Z., Yan P., Cao L., He H., Fu J., Xin Y., Tan Y., Mao B., Zhao B., Yang J., Yuan L., Luo X.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(29) 
<i>OsPDCD5</i> negatively regulates plant architecture and grain yield in rice.
Ma Z., Wu T., Huang K., Jin Y.M., Li Z., Chen M., Yun S., Zhang H., Yang X., Chen H., Bai H., Du L., Ju S., Guo L., Bian M., Hu L., Du X., Jiang W.
Front Plant Sci 2020  11  709
A Novel AP2/ERF Transcription Factor, OsRPH1, Negatively Regulates plant height in Rice.
Zhou F., Wang C.Y., Gutensohn M., Jiang L., Zhang P., Zhang D., Dudareva N., Lu S.
Proc. Natl. Acad. Sci. U.S.A. 2017  114(26)  6866-6871
A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice.
Zhou W., Malabanan P.B., Abrigo E.
Euphytica 2014  201  97-107
OsHox4 regulates GA signaling by interacting with DELLA-like genes and GA oxidase genes in rice
Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012  53(9)  1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Yamaguchi S.
Annual Review of Plant Biology 2008  59  225-51
Gibberellin metabolism and its regulation.
Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004  134  1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
Kaneko, M., H. Itoh, Y. Inukai, T. Sakamoto, M. Ueguchi-Tanaka, M. Ashikari and M. Matsuoka
Plant J. 2003  35 (1)  104-115
Where do gibberellin biosynthesis and gibberellin signaling occur in rice plants?
Itoh,H., Ueguchi-Tanaka,M., Sentoku,N., Kitano,H., Matsuoka,M. and Kobayashi,M.
Proc. Natl. Acad. Sci. U.S.A. 2001  98(15)  8909-8914
Cloning and functional analysis of two gibberellin 3 beta -hydroxylase genes that are differently expressed during the growth of rice.
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DB Reference
Gramene ID GR:0061381
Gene Ontology regulation of starch biosynthetic process( GO:0010581 )
pollen wall assembly( GO:0010208 )
pollen development( GO:0009555 )
iron ion binding( GO:0005506 )
plastid( GO:0009536 )
gibberellin metabolic process( GO:0009685 )
isopenicillin-N synthase activity( GO:0016216 )
gibberellin biosynthetic process( GO:0009686 )
gibberellin 3-beta-dioxygenase activity( GO:0016707 )
antibiotic biosynthetic process( GO:0017000 )
hormone biosynthetic process( GO:0042446 )
Trait Ontology starch grain synthesis( TO:0002658 )
seed set percent( TO:0000455 )
pollen fertility( TO:0000421 )
pollen abortion type( TO:0000218 )
1000-seed weight( TO:0000382 )
grain yield per plant( TO:0000449 )
Plant Ontology pollen development stage( PO:0001007 )
anther( PO:0009066 )
tapetum( PO:0025313 )
Related Strains
Phenotype images
Last updated
Dec 19, 2023