Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RSP29
Gene Symbol Synonym OsRS29, Os-RS29, OsRSp29, Os-RSp29, RSp29, RRM1-78, OsRRM1-78
CGSNL Gene Name RS domain protein 29
Gene Name Synonym RS domain protein 29, RS subfamily protein 29, SR-rich splicing factor 29, Serine/arginine-rich splicing factor 29, RNA recognition motif domain protein 1-78
Protein Name RS domain protein 29
Allele rs29
Chromosome No. 4
Explanation TO:0020091: manganese content.
Trait Class
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os04g02870.1
LOC_Os04g02870.2
LOC_Os04g02870.3
LOC_Os04g02870.4
RAP ID Os04g0118900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024  12  e17668
Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
Cai Y., Zhang W., Fu Y., Shan Z., Xu J., Wang P., Kong F., Jin J., Yan H., Ge X., Wang Y., You X., Chen J., Li X., Chen W., Chen X., Ma J., Tang X., Zhang J., Bao Y., Jiang L., Wang H., Wan J.
Plant Biotechnol. J. 2022  20(7)  1387-1401
Du13 encodes a C2 H2 zinc-finger protein that regulates Wxb pre-mRNA splicing and microRNA biogenesis in rice endosperm.
Butt H., Bazin J., Prasad KVSK., Awad N., Crespi M., Reddy A.S.N., Mahfouz M.M.
Cells 2022  11(11) 
The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses.
Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018  30(10)  2267-2285
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010  22(9)  2926-2929
Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
Isshiki M, Tsumoto A, Shimamoto K.
Plant Cell 2006  18(1)  146-58
The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
DB Reference
Gramene ID -
Ontologies
Gene Ontology spliceosomal complex( GO:0005681 )
nuclear speck( GO:0016607 )
RNA binding( GO:0003723 )
nuclear mRNA cis splicing, via spliceosome( GO:0045292 )
regulation of alternative nuclear mRNA splicing, via spliceosome( GO:0000381 )
nucleus( GO:0005634 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 14, 2025

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