Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SCL57
Gene Symbol Synonym Os-SCL57, OsSCL57, RRM1-203, OsRRM1-203
CGSNL Gene Name SC35-LIKE PROTEIN 57
Gene Name Synonym SC35-like protein 57, SCL subfamily protein 57, RNA recognition motif domain protein 1-203
Protein Name SC35-LIKE PROTEIN 57
Allele scl57
Chromosome No. 11
Explanation TO:0020102: phosphate content.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os11g47830.1
LOC_Os11g47830.2
RAP ID Os11g0704700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024  12  e17668
Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
Zhang J., Sun Y., Zhou Z., Zhang Y., Yang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Li L., Xu Z.
Sci Rep 2022  12(1)  8385
OsSCL30 overexpression reduces the tolerance of rice seedlings to low temperature, drought and salt.
Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018  30(10)  2267-2285
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010  22(9)  2926-2929
Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of alternative nuclear mRNA splicing, via spliceosome( GO:0000381 )
nuclear mRNA cis splicing, via spliceosome( GO:0045292 )
RNA binding( GO:0003723 )
nuclear speck( GO:0016607 )
phosphate ion homeostasis( GO:0055062 )
response to starvation( GO:0042594 )
nucleus( GO:0005634 )
chloroplast( GO:0009507 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 14, 2025

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