Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SCL30A
Gene Symbol Synonym Os-SCL30a, OsSCL30a, SCL30a, RRM1-28, OsRRM1-28
CGSNL Gene Name SC35-LIKE PROTEIN 30A
Gene Name Synonym SC35-like protein 30a, SCL subfamily protein 30a, RNA recognition motif domain protein 1-28
Protein Name SC35-LIKE PROTEIN 30A
Allele
Chromosome No. 2
Explanation
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os02g15310.1
LOC_Os02g15310.2
LOC_Os02g15310.3
LOC_Os02g15310.4
RAP ID Os02g0252100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024  12  e17668
Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
Zhang J., Sun Y., Zhou Z., Zhang Y., Yang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Li L., Xu Z.
Sci Rep 2022  12(1)  8385
OsSCL30 overexpression reduces the tolerance of rice seedlings to low temperature, drought and salt.
Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018  30(10)  2267-2285
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010  22(9)  2926-2929
Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
Isshiki M, Tsumoto A, Shimamoto K.
Plant Cell 2006  18(1)  146-58
The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
regulation of alternative nuclear mRNA splicing, via spliceosome( GO:0000381 )
nuclear mRNA cis splicing, via spliceosome( GO:0045292 )
RNA binding( GO:0003723 )
nuclear speck( GO:0016607 )
response to starvation( GO:0042594 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 14, 2025

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