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Basic Information
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CGSNL Gene Symbol
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SCL26
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Gene Symbol Synonym
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Os-SCL26, OsSCL26, RRM1-60, OsRRM1-60
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CGSNL Gene Name
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SC35-LIKE PROTEIN 26
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Gene Name Synonym
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SC35-like protein 26, SCL subfamily protein 26, RNA recognition motif domain protein 1-60
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Protein Name
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SC35-LIKE PROTEIN 26
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Allele
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scl26, osscl26
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Chromosome No.
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3
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Explanation
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TO:0020102: phosphate content. GO:2000185: regulation of phosphate transmembrane transport. TO:0020114: shoot system phosphorus content.
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Trait Class
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Vegetative organ - Culm
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Os03g25770.1
LOC_Os03g25770.2
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RAP ID
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Os03g0374575
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024 12 e17668
Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
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Lu S., Ye J., Li H., He F., Qi Y., Wang T., Wang W., Zheng L.
Plants (Basel) 2023 12(12)
The Splicing Factor OsSCL26 Regulates Phosphorus Homeostasis in Rice.
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Zhang J., Sun Y., Zhou Z., Zhang Y., Yang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Li L., Xu Z.
Sci Rep 2022 12(1) 8385
OsSCL30 overexpression reduces the tolerance of rice seedlings to low temperature, drought and salt.
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Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018 30(10) 2267-2285
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
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Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010 22(9) 2926-2929
Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
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Isshiki M, Tsumoto A, Shimamoto K.
Plant Cell 2006 18(1) 146-58
The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to starvation( GO:0042594 )
nuclear mRNA 5'-splice site recognition( GO:0000395 )
nucleus( GO:0005634 )
regulation of alternative nuclear mRNA splicing, via spliceosome( GO:0000381 )
nuclear mRNA cis splicing, via spliceosome( GO:0045292 )
RNA binding( GO:0003723 )
nuclear speck( GO:0016607 )
regulation of phosphate transport( GO:0010966 )
phosphate ion homeostasis( GO:0055062 )
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Trait Ontology
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phosphorus content( TO:0001024 )
phosphorus uptake( TO:0000511 )
plant height( TO:0000207 )
shoot dry weight( TO:0000552 )
root length( TO:0000227 )
root dry weight( TO:0000078 )
relative plant height( TO:0001034 )
relative root length( TO:0000516 )
relative root dry weight( TO:0000644 )
relative shoot dry weight( TO:0000636 )
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Plant Ontology
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root( PO:0009005 )
leaf( PO:0025034 )
stem node( PO:0020141 )
leaf sheath( PO:0020104 )
vascular bundle( PO:0005020 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Jan 14, 2025
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Update info.