Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SCL25
Gene Symbol Synonym Os-SCL25, OsSCL25, RRM1-146, OsRRM1-146
CGSNL Gene Name SC35-LIKE PROTEIN 25
Gene Name Synonym SC35-like protein 25, SCL subfamily protein 25, RNA recognition motif domain protein 1-146
Protein Name SC35-LIKE PROTEIN 25
Allele scl25, scl25-1
Chromosome No. 7
Explanation TO:0020102: phosphate content.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os07g43950.1
RAP ID Os07g0633200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024  12  e17668
Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
Zhang J., Sun Y., Zhou Z., Zhang Y., Yang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Li L., Xu Z.
Sci Rep 2022  12(1)  8385
OsSCL30 overexpression reduces the tolerance of rice seedlings to low temperature, drought and salt.
Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018  30(10)  2267-2285
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010  22(9)  2926-2929
Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
Isshiki M, Tsumoto A, Shimamoto K.
Plant Cell 2006  18(1)  146-58
The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nuclear mRNA 5'-splice site recognition( GO:0000395 )
nucleus( GO:0005634 )
regulation of alternative nuclear mRNA splicing, via spliceosome( GO:0000381 )
nuclear mRNA cis splicing, via spliceosome( GO:0045292 )
RNA binding( GO:0003723 )
nuclear speck( GO:0016607 )
response to starvation( GO:0042594 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Jan 14, 2025

/rice/oryzabase