Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SRP20 |
| Gene Symbol Synonym | Os-SR40, OsSR40, SR40, OsSRp20, Os-SRp20, SF2, OsSF2 |
| CGSNL Gene Name | SERINE/ARGININE-RICH PROTEIN 20 |
| Gene Name Synonym | Serine/Arginine-Rich Protein Splicing Factor 20, Serine/Arginine-Rich Protein 20, SR Protein 20, SR subfamily protein 20, pre-mRNA splicing factor SF2 |
| Protein Name | SERINE/ARGININE-RICH PROTEIN 20 |
| Allele | sr40 |
| Chromosome No. | 1 |
| Explanation | Os-SR40 in Barta et al. 2010, Dong et al. 2018. TO:0020102: phosphate content. |
| Trait Class |
Tolerance and resistance - Stress tolerance
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os01g21420.1
|
| RAP ID |
Os01g0316550 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Butt H., Bazin J., Prasad KVSK., Awad N., Crespi M., Reddy A.S.N., Mahfouz M.M.
Cells 2022 11(11) The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses.
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Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018 30(10) 2267-2285 Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
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Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010 22(9) 2926-2929 Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
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Isshiki M, Tsumoto A, Shimamoto K.
Plant Cell 2006 18(1) 146-58 The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
phosphate ion homeostasis( GO:0055062 )
response to starvation( GO:0042594 ) response to salt stress( GO:0009651 ) |
| Trait Ontology |
salt tolerance( TO:0006001 )
|
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Sep 21, 2022 | |
