Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SRP33B |
| Gene Symbol Synonym | Os-SR33, OsSR33, SR33, OsSRp33b, Os-SRp33b, RRM1-148, OsRRM1-148 |
| CGSNL Gene Name | SERINE/ARGININE-RICH PROTEIN 33B |
| Gene Name Synonym | Serine/Arginine-Rich Protein Splicing Factor 33b, Serine/Arginine-Rich Protein 33b, SR Protein 33b, SR subfamily protein 33b, RNA recognition motif domain protein 1-148 |
| Protein Name | SERINE/ARGININE-RICH PROTEIN 33B |
| Allele | sr33 |
| Chromosome No. | 7 |
| Explanation | LOC_Os07g47630. Os-SR33 in Barta et al. 2010, Dong et al. 2018. TO:0020102: phosphate content. |
| Trait Class |
Tolerance and resistance - Stress tolerance
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os07g47630.1
LOC_Os07g47630.2 LOC_Os07g47630.3 LOC_Os07g47630.4 LOC_Os07g47630.6 LOC_Os07g47630.7 LOC_Os07g47630.8 |
| RAP ID |
Os07g0673500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024 12 e17668 Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
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Dong C., He F., Berkowitz O., Liu J., Cao P., Tang M., Shi H., Wang W., Li Q., Shen Z., Whelan J., Zheng L.
Plant Cell 2018 30(10) 2267-2285 Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (<i>Oryza sativa</i>).
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Barta A., Kalyna M., Reddy A.S.N.
Plant Cell 2010 22(9) 2926-2929 Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.
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Isshiki M, Tsumoto A, Shimamoto K.
Plant Cell 2006 18(1) 146-58 The serine/arginine-rich protein family in rice plays important roles in constitutive and alternative splicing of pre-mRNA.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
phosphate ion homeostasis( GO:0055062 )
nucleus( GO:0005634 ) regulation of alternative nuclear mRNA splicing, via spliceosome( GO:0000381 ) nuclear mRNA cis splicing, via spliceosome( GO:0045292 ) RNA binding( GO:0003723 ) nuclear speck( GO:0016607 ) response to starvation( GO:0042594 ) |
| Trait Ontology | - |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jan 14, 2025 | |
