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Basic Information
CGSNL Gene Symbol AMT1;1
Gene Symbol Synonym OsAMT1;1, OsAMT1:1, OsAMT1, AMT1-1, AMT1, OsAMT1p, OsAMT1-1, Osamt1-1, "OsAMT1,1", OsAMT1.1, AMT1.1, FCO12
Gene Name Synonym ammonium transporter-1;1, ammonium transporter 1;1, Ammonium transporter 1 member 1, Ammonium transporter-1, ammonium transporter 1-1, "NH4+ transporter 1,1", NH4+ transporter 1, Functioning in Cesium Over-transport 12
Chromosome No. 4
Explanation Q7XQ12. AF289477, AF001505. TO:0020098: nitrate sensitivity. GO:1901698: response to nitrogen compound.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK073718
MSU ID LOC_Os04g43070.1
RAP ID Os04g0509600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Gao J., Ge S., Wang H., Fang Y., Sun L., He T., Cheng X., Wang D., Zhou X., Cai H., Li C., Liu Y., E Y., Meng J., Chen W.
Front Plant Sci 2023  14  1131937
Biochar-extracted liquor stimulates nitrogen related gene expression on improving nitrogen utilization in rice seedling.
Seo J.S., Kim S.H., Shim J.S., Um T., Oh N., Park T., Kim Y.S., Oh S.J., Kim J.K.
Plant Physiol. 2023   
The rice NUCLEAR FACTOR-YA5 and MICRORNA169a module promotes nitrogen utilization during nitrogen deficiency.
Liu K., Sakuraba Y., Ohtsuki N., Yang M., Ueda Y., Yanagisawa S.
Plant Biotechnol. J. 2023   
CRISPR/Cas9-mediated elimination of OsHHO3, a transcriptional repressor of three AMMONIUM TRANSPORTER1 genes, improves nitrogen use efficiency in rice.
Jiang M., Song Y., Yang R., Zheng C., Zheng Y., Zhang H., Li S., Tan Y., Huang J., Shu Q., Li R.
Plant Commun 2023    100674
Melatonin activates the OsbZIP79-OsABI5 module that orchestrates nitrogen and ROS homeostasis to alleviate nitrogen-limitation stress in rice.
Liu L., Cui K., Qi X., Wu Y., Huang J., Peng S.
Front Plant Sci 2023  14  1244281
Varietal responses of root characteristics to low nitrogen application explain the differing nitrogen uptake and grain yield in two rice varieties.
Paul K., Saha C., Nag M., Mandal D., Naiya H., Sen D., Mitra S., Kumar M., Bose D., Mukherjee G., Naskar N., Lahiri S., Das Ghosh U., Tripathi S., Sarkar M.P., Banerjee M., Kleinert A., Valentine A.J., Tripathy S., Sinharoy S., Seal A.
Plant Cell 2020  32(2)  486-507
A Tripartite Interaction among the Basidiomycete <i>Rhodotorula mucilaginosa</i>, N2-Fixing Endobacteria, and Rice Improves Plant Nitrogen Nutrition.
Lee S., Marmagne A., Park J., Fabien C., Yim Y., Kim S.J., Kim T.H., Lim P.O., Masclaux-Daubresse C., Nam H.G.
Plant J. 2020  103(1)  7-20
Concurrent activation of OsAMT1;2 and OsGOGAT1 in rice leads to enhanced nitrogen use efficiency under nitrogen limitation.
Wang P., Yamaji N., Inoue K., Mochida K., Ma J.F.
New Phytol. 2020  226(1)  156-169
Plastic transport systems of rice for mineral elements in response to diverse soil environmental changes.
Yi J., Gao J., Zhang W., Zhao C., Wang Y., Zhen X.
Front Plant Sci 2019  10  1061
Differential Uptake and Utilization of Two Forms of Nitrogen in <i>Japonica</i> Rice Cultivars From North-Eastern China.
Li S., Tian Y., Wu K., Ye Y., Yu J., Zhang J., Liu Q., Hu M., Li H., Tong Y., Harberd N.P., Fu X.
Nature 2018  560(7720)  595-600
Modulating plant growth-metabolism coordination for sustainable agriculture.
Beier M.P., Obara M., Taniai A., Sawa Y., Ishizawa J., Yoshida H., Tomita N., Yamanaka T., Ishizuka Y., Kudo S., Yoshinari A., Takeuchi S., Kojima S., Yamaya T., Hayakawa T.
Plant J. 2018  93(6)  992-1006
Lack of ACTPK1, an STY kinase, enhances ammonium uptake and use, and promotes growth of rice seedlings under sufficient external ammonium.
Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018  8(9)  383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
Wang W., Hu B., Yuan D., Liu Y., Che R., Hu Y., Ou S., Liu Y., Zhang Z., Wang H., Li H., Jiang Z., Zhang Z., Gao X., Qiu Y., Meng X., Liu Y., Bai Y., Liang Y., Wang Y., Zhang L., Li L., Sodmergen, Jing H., Li J., Chu C.
Plant Cell 2018  30(3)  638-651
Expression of the Nitrate Transporter Gene <i>OsNRT1.1A/OsNPF6.3</i> Confers High Yield and Early Maturation in Rice.
Sun Y., Luo W., Jain A., Liu L., Ai H., Liu X., Feng B., Zhang L., Zhang Z., Guohua X., Sun S.
BMC Plant Biol. 2018  18(1)  241
OsPHR3 affects the traits governing nitrogen homeostasis in rice.
Yamaki T., Otani M., Ono K., Mimura T., Oda K., Minamii T., Matsumoto S., Matsuo Y., Kawamukai M., Akihiro T.
Physiol Plant 2017   
Isolation and characterization of rice cesium transporter genes from a rice-transporter-enriched yeast expression library.
Zhu J., Liang J., Xu Z., Fan X., Zhou Q., Shen Q., Xu G.
AoB Plants 2015  7 
Root aeration improves growth and nitrogen accumulation in rice seedlings under low nitrogen.
Yang S., Hao D., Cong Y., Jin M., Su Y.
Plant Cell Rep. 2015  34(2)  321-30
The rice OsAMT1;1 is a proton-independent feedback regulated ammonium transporter.
Zhao S.P.a b, Ye X.Z.a, Shi W.M.c
Russian Journal of Plant Physiology 2014  61  707-713
Expression of OsAMT1 (1.1-1.3) in rice varieties differing in nitrogen accumulation
Pérez-Tienda J., Corrêa A., Azcón-Aguilar C., Ferrol N.
Plant Physiol. Biochem. 2014  75  1-8
Transcriptional regulation of host NH₄⁺ transporters and GS/GOGAT pathway in arbuscular mycorrhizal rice roots.
Fan X., Xie D., Chen J., Lu H., Xu Y., Ma C., Xu G.
Plant Sci. 2014  227  1-11
Over-expression of OsPTR6 in rice increased plant growth at different nitrogen supplies but decreased nitrogen use efficiency at high ammonium supply.
Yang B.a, Wang X.M.a, Ma H.Y.a, Jia Y.a, Li X.b, Dai C.C.a
Plant Growth Regul. 2014  73  165-179
Effects of the fungal endophyte Phomopsis liquidambari on nitrogen uptake and metabolism in rice
Gaur V.S., Singh U.S., Gupta A.K., Kumar A.
Mol. Biol. Rep. 2012  39(8)  8035-44
Influence of different nitrogen inputs on the members of ammonium transporter and glutamine synthetase genes in two rice genotypes having differential responsiveness to nitrogen.
Li S.M., Li B.Z., Shi W.M.
Pedosphere 2012  22  860-869
Expression Patterns of Nine Ammonium Transporters in Rice in Response to N Status
Wang H., Ahan J., Wu Z., Shi D., Liu B., Yang C.
Plant Soil 2012  355  131-147
Alteration of nitrogen metabolism in rice variety 'Nipponbare' induced by alkali stress
Wang H., Wu Z., Han J., Zheng W., Yang C.
PLoS ONE 2012  7(5)  e37817
Comparison of ion balance and nitrogen metabolism in old and young leaves of alkali-stressed rice plants.
Marcus Vinícius Loss Sperandio, Leandro Azevedo Santos, Carlos Alberto Bucher, Manlio Silvestre Fernandes, Sonia Regina de Souza
Plant Sci. 2011  180(2)  251-8
Isoforms of plasma membrane H(+)-ATPase in rice root and shoot are differentially induced by starvation and resupply of NO₃⁻ or NH₄+.
Sperandio M.V.L., Santos L.A., Bucher C.A., Fernandes M.S., de Souza S.R.
Plant Science 2011  180  251-258
Isoforms of plasma membrane H+-ATPase in rice root and shoot are differentially induced by starvation and resupply of NO3- or NH4+
Obara M., Takeda T., Hayakawa T., Yamaya T.
Soil Science and Plant Nutrition 2011  57  80-92
Mapping quantitative trait loci controlling root length in rice seedlings grown with low or sufficient NH+4 supply using backcross recombinant lines derived from a cross between Oryza sativa L. and Oryza glaberrima Steud
Ding Z., Wang C., Chen S., Yu S.
BMC Evol. Biol. 2011  11  61
Diversity and selective sweep in the OsAMT1;1 genomic region of rice.
LI B.-z., MERRICK M., LI S.-m., LI H.-y., ZHU S.-w., SHI W.-m., SU Y.-h.
Rice Science 2009  16(4)  314-322
Molecular Basis and Regulation of Ammonium Transporter in Rice
Y H Duan, Y L Zhang, L T Ye, X R Fan, G H Xu, Q R Shen
Ann. Bot. 2007  99(6)  1153-60
Responses of rice cultivars with different nitrogen use efficiency to partial nitrate nutrition.
Kumar A., N. Silim S., Okamoto M., Y. Siddiqi M., D. M. Glass A.
Plant, cell & environment 2003  26(6)  907-914
Differential expression of three members of the AMT1 gene family encoding putative high-affinity NH4+ transporters in roots of Oryza sativa subspecies indica.
Sonoda, Y., A. Ikeda, S. Saiki, T. Yamaya and J. Yamaguchi
Plant Cell Physiol. 2003  44(12)  1396-1402
Feedback regulation of the ammonium transporter gene family AMT1 by glutamine in rice.
Sonoda, Y., A. Ikeda, S. Saiki, N. von Wiren, T. Yamaya and J. Yamaguchi
Plant Cell Physiol. 2003  44  726-734
Distinct expression and function of three ammonium transporter genes (OsAMT1;1 - 1;3) in rice.
Ninnemann,O., Jauniaux,J.C. and Frommer,W.B.
EMBO J. 1994  13(15)  3464-3471
Identification of a high affinity NH4+ transporter from plants.
TextPresso Search Search textpresso for AMT1;1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061104
Gene Ontology ammonium transmembrane transporter activity( GO:0008519 )
ammonium transport( GO:0015696 )
membrane( GO:0016020 )
integral to membrane( GO:0016021 )
cellular response to starvation( GO:0009267 )
response to starvation( GO:0042594 )
response to nitrate( GO:0010167 )
transmembrane transport( GO:0055085 )
metal ion transport( GO:0030001 )
response to anoxia( GO:0034059 )
response to symbiotic fungus( GO:0009610 )
response to fungus( GO:0009620 )
response to ammonium ion( GO:0060359 )
response to flooding( GO:0009413 )
response to nutrient( GO:0007584 )
cellular response to nitrogen starvation( GO:0006995 )
response to nutrient levels( GO:0031667 )
Trait Ontology flooding related trait( TO:0000114 )
nutrient sensitivity( TO:0000480 )
nitrogen sensitivity( TO:0000011 )
plant growth hormone sensitivity( TO:0000401 )
Plant Ontology root( PO:0009005 )
Related Strains
Phenotype images
Last updated
Jan 17, 2024