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Basic Information
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CGSNL Gene Symbol
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TGW3
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Gene Symbol Synonym
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GL3.3, OsSK41, SK41, OsGSK5, GSK5, qTGW3, OsTGW3, OsGSK5/OsSK41, OsSK41/OsGSK5, GL3.3/TGW3
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CGSNL Gene Name
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THOUSAND GRAIN WEIGHT 3
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Gene Name Synonym
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GSK3/SHAGGY-Like Kinase 41, QTL FOR THOUSAND GRAIN WEIGHT ON CHROMOSOME 3, GSK3-like Kinase 5, Glycogen Synthase Kinase-like 5, thousand grain weight 3, thousand grain weight on chromosome 3
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Protein Name
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SHAGGY-LIKE KINASE 41
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Allele
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gl3.3Aus, gl3.3Jap, tgw3-70, sk41, sk41.1, sk41.2, tgw3-1
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Chromosome No.
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3
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Explanation
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a GSK3/SHAGGY-like kinase clade IV member. GEO DataSets: GSE98924. an orthologue of a Medicago GSK3. TO:0000919: grain weight. PO:0030123: panicle inflorescence.
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Trait Class
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Vegetative organ - Culm
Seed - Morphological traits
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Storage substances
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK070062
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MSU ID
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LOC_Os03g62500.1
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RAP ID
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Os03g0841800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Shen S.Y., Ma M., Bai C., Wang W.Q., Zhu R.B., Gao Q., Song X.J.
Dev. Cell 2024 59(4) 448-464.e8
Optimizing rice grain size.by attenuating phosphorylation-triggered functional impairment of a chromatin modifier ternary complex.
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Ma M., Shen S.Y., Bai C., Wang W.Q., Feng X.H., Ying J.Z., Song X.J.
Cell Rep 2023 42(3) 112187
Control of grain size in rice by TGW3 phosphorylation of OsIAA10 through potentiation of OsIAA10-OsARF4-mediated auxin signaling.
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Hu Z., Niu F., Yan P., Wang K., Zhang L., Yan Y., Zhu Y., Dong S., Ma F., Lan D., Liu S., Xin X., Wang Y., Yang J., Cao L., Wu S., Luo X.
J Integr Plant Biol 2023 65(7) 1782-1793
The kinase OsSK41/OsGSK5 negatively regulates amylose content in rice endosperm by affecting the interaction between OsEBP89 and OsBP5.
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Ma F., Zhang F., Zhu Y., Lan D., Yan P., Wang Y., Hu Z., Zhang X., Hu J., Niu F., Liu M., He S., Cui J., Yuan X., Yan Y., Wu S., Cao L., Bian H., Yang J., Li Z., Luo X.
J Integr Plant Biol 2023 65(7) 1753-1766
Auxin signaling module OsSK41-OsIAA10-OsARF regulates grain yield traits in rice.
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Xia D., Zhou H., Liu R., Dan W., Li P., Wu B., Chen J., Wang L., Gao G., Zhang Q., He Y.
Mol Plant 2018 11(5) 754-756
GL3.3, a Novel QTL Encoding a GSK3/SHAGGY-like Kinase, Epistatically Interacts with GS3 to Produce Extra-long Grains in Rice.
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Ying J.Z., Ma M., Bai C., Huang X.H., Liu J.L., Fan Y.Y., Song X.J.
Mol Plant 2018 11(5) 750-753
TGW3, a Major QTL that Negatively Modulates Grain Length and Weight in Rice.
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Hu Z., Lu S.J., Wang M.J., He H., Sun L., Wang H., Liu X.H., Jiang L., Sun J.L., Xin X., Kong W., Chu C., Xue H.W., Yang J., Luo X., Liu J.X.
Mol Plant 2018 11(5) 736-749
A Novel QTL qTGW3 Encodes the GSK3/SHAGGY-Like Kinase OsGSK5/OsSK41 that Interacts with OsARF4 to Negatively Regulate grain size and Weight in Rice.
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Thitisaksakul M., Maria C. Arias, Dong S., Diane M. Beckles
Funct. Plant Biol. 2017 44 705-719
Overexpression of GSK3-like Kinase 5 (OsGSK5) in rice (Oryza sativa) enhances salinity tolerance in part via preferential carbon allocation to root starch
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Thitisaksakul M., Dong S., Beckles D.M.
Plant Signal Behav 2017 12(12) e1403708
How rice Glycogen Synthase Kinase-like 5 (OsGSK5) integrates salinity stress response to source-sink adaptation: A proposed model.
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Mi-Jeong Yoo, Victor A Albert, Pamela S Soltis, Douglas E Soltis
BMC Plant Biol. 2006 6 3
Phylogenetic diversification of glycogen synthase kinase 3/SHAGGY-like kinase genes in plants.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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protein serine/threonine kinase activity( GO:0004674 )
ATP binding( GO:0005524 )
phloem transport( GO:0010233 )
defense response to bacterium( GO:0042742 )
carbohydrate metabolic process( GO:0005975 )
starch metabolic process( GO:0005982 )
response to salt stress( GO:0009651 )
regulation of auxin mediated signaling pathway( GO:0010928 )
seed development( GO:0048316 )
nucleus( GO:0005634 )
brassinosteroid mediated signaling( GO:0009742 )
response to brassinosteroid stimulus( GO:0009741 )
regulation of polysaccharide biosynthetic process( GO:0032885 )
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Trait Ontology
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seed size( TO:0000391 )
grain weight( TO:0000590 )
grain length( TO:0000734 )
grain size( TO:0000397 )
seed development trait( TO:0000653 )
auxin sensitivity( TO:0000163 )
salt tolerance( TO:0006001 )
starch content( TO:0000696 )
bacterial blight disease resistance( TO:0000175 )
amylose content( TO:0000196 )
brassinosteroid sensitivity( TO:0002677 )
1000-seed weight( TO:0000382 )
seed length to width ratio( TO:0000411 )
plant height( TO:0000207 )
grain yield per plant( TO:0000449 )
filled grain number( TO:0000447 )
primary branch number( TO:0000547 )
secondary branch number( TO:0000557 )
tiller number( TO:0000346 )
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Plant Ontology
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seed development stage( PO:0001170 )
root( PO:0009005 )
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Related Strains
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Phenotype images
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Last updated
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Feb 22, 2026
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Update info.