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Basic Information
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CGSNL Gene Symbol
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NAC3
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Gene Symbol Synonym
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OsNAC3, NAC67, ONAC067, OnNAC3*, OsNAC3/ONAC067, DLN180, OsDLN180
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CGSNL Gene Name
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NAC DOMAIN-CONTAINING PROTEIN 3
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Gene Name Synonym
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NAC 3, OsNAC gene-3, ONNAC GENE 3, NAC domain-containing protein 67, DLN repressor 180, DLN motif protein 180
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Protein Name
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NAC DOMAIN-CONTAINING PROTEIN 3
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Allele
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Osnac3
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Chromosome No.
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7
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Explanation
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AB028182. Q7EZT1. This gene controls the formation of shoot apical mristem, organ separation and flower morphogenesis. GO:1900140: regulation of seedling development. TO:0000949: seedling growth and development trait. TO:0000975: grain width.
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Trait Class
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Vegetative organ - Shoot apical meristem(SAM)
Biochemical character
Tolerance and resistance - Stress tolerance
Tolerance and resistance - Insect resistance
Character as QTL - Plant growth activity
Character as QTL - Yield and productivity
Seed - Morphological traits - Grain shape
Vegetative organ - Culm
Vegetative organ - Root
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK073667
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MSU ID
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LOC_Os07g12340.1
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RAP ID
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Os07g0225300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Kulsum U., Akter N., Akama K.
Plant Cell Rep. 2025 44(5) 95
Double-truncated version of OsGADs leads to higher GABA accumulation and stronger stress tolerance in Oryza sativa L. var. japonica.
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Huang C., He Y., Li W., Liu L., Wu Z., Zhong Y., Wang C., Peng L., Sun S., Huang Z., Zhao J., Wang Z.
Sci Adv 2025 11(26) eadw0421
Feedback transcription regulation between OsNAC3 and OsDREB1A promotes postgermination growth in rice.
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Jia Q., Zhang X., Liu Q., Li J., Wang W., Ma X., Zhu B., Li S., Gong S., Tian J., Yuan M., Zhao Y., Zhou D.X.
Genome Biol. 2023 24(1) 198
A DNA adenine demethylase impairs PRC2-mediated repression of genes marked by a specific chromatin signature.
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Prodhan Z.H., Islam S.A., Alam M.S., Li S., Jiang M., Tan Y., Shu Q.
Plants (Basel) 2022 11(21)
Impact of <i>OsBadh2</i> Mutations on Salt Stress Response in Rice.
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Khan I., Jan R., Asaf S., Khan A.L., Bilal S., Kim K.M., Al-Harrasi A.
Int J Mol Sci 2022 23(23)
Genome and Transcriptome-Wide Analysis of <i>OsWRKY</i> and <i>OsNAC</i> Gene Families in <i>Oryza sativa</i> and Their Response to White-Backed Planthopper Infestation.
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Mohanty B.
Front Genet 2021 12 639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Zhang X., Long Y., Chen X., Zhang B., Xin Y., Li L., Cao S., Liu F., Wang Z., Huang H., Zhou D., Xia J.
BMC Plant Biol. 2021 21(1) 546
A NAC transcription factor OsNAC3 positively regulates ABA response and salt tolerance in rice.
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Wang Y., Huang L., Du F., Wang J., Zhao X., Li Z., Wang W., Xu J., Fu B.
Sci Rep 2021 11(1) 5166
Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7)
Analysis of Rice Proteins with DLN repressor Motif/S.
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Ghosh T., Rai M., Tyagi W., Challam C.
Plant Signal Behav 2016 11(5) e1138192
Seedling stage low temperature response in tolerant and susceptible rice genotypes suggests role of relative water content and members of OsSNAC gene family.
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Nuruzzaman M., Sharoni A.M., Kikuchi S.
Front Microbiol 2013 4 248
Roles of NAC transcription factors in the regulation of biotic and abiotic stress responses in plants.
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Nuruzzaman M., Sharoni A.M., Satoh K., Moumeni A., Venuprasad R., Serraj R., Kumar A., Leung H., Attia K., Kikuchi S.
Mol. Genet. Genomics 2012 287(5) 389-410
Comprehensive gene expression analysis of the NAC gene family under normal growth conditions, hormone treatment, and drought stress conditions in rice using near-isogenic lines (NILs) generated from crossing Aday Selection (drought tolerant) and IR64.
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Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009 2 217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
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Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008 280(6) 547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
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Lin,R., Zhao,W., Meng,X., Wang,M. and Peng,Y.
Plant Sci. 2007 172(1) 120-130
Rice gene OsNAC19 encodes a novel NAC-domain transcription factor and responds to infection by Magnaporthe grisea
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Ooka H., Satoh K., Doi K., Nagata T., Otomo Y., Murakami K., Matsubara K., Osato N., Kawai J., Carninci P., Hayashizaki Y., Suzuki K., Kojima K., Takahara Y., Yamamoto K., Kikuchi S.
DNA Res. 2003 10(6) 239-47
Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana.
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Kikuchi,K., Ueguchi-Tanaka,M., Yoshida,K.T., Nagato,Y., Matsusoka,M. and Hirano,H.Y.
Mol. Gen. Genet. 2000 262(6) 1047-1051
Molecular analysis of the NAC gene family in rice.
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Kikuchi, K., K.T. Yoshida, Y. Nagato and H.Y. Hirano
RGN 1998 15 160-161
Chromosomal location of the OsNAC genes.
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Kikuchi, K., K.T. Yoshida, M. Uekuchi-Tanaka, M. Matsuoka, Y. Nagato and H.Y. Hirano
RGN 1997 14 125-126
Molecular characterization of the rice OsNAC genes.
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DB Reference
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Gramene ID
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GR:0060582
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Ontologies
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Gene Ontology
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positive regulation of gibberellin biosynthetic process( GO:0010372 )
gibberellic acid mediated signaling( GO:0009740 )
defense response to insect( GO:0002213 )
abscisic acid mediated signaling( GO:0009738 )
response to abscisic acid stimulus( GO:0009737 )
response to salt stress( GO:0009651 )
response to deep water( GO:0030912 )
aminoacyl-tRNA ligase activity( GO:0004812 )
DNA binding( GO:0003677 )
regulation of transcription( GO:0045449 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
response to cold( GO:0009409 )
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Trait Ontology
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jasmonic acid sensitivity( TO:0000172 )
cold tolerance( TO:0000303 )
submergence tolerance( TO:0000524 )
salt tolerance( TO:0006001 )
abscisic acid sensitivity( TO:0000615 )
sodium content( TO:0000608 )
white-backed planthopper resistance( TO:0000205 )
gibberellic acid content( TO:0002675 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
filled grain number( TO:0000447 )
grain length( TO:0000734 )
grain width( TO:0000402 )
1000-seed weight( TO:0000382 )
root length( TO:0000227 )
seedling height( TO:0000019 )
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Plant Ontology
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root( PO:0009005 )
leaf sheath( PO:0020104 )
seedling development stage( PO:0007131 )
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Related Strains
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Phenotype images
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Last updated
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Oct 10, 2025
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Update info.