Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol OSD3
Gene Symbol Synonym OsCYP92A9, CYP92A9, OsCYP71A1, CYP71A1, OsCYP71W6, CYP71W6, BBH, OsBBH, SD3, OsSD3
CGSNL Gene Name SA-DEFICIENT GENE 3
Gene Name Synonym cytochrome P450 71A1, Cytochrome P450 92A9, benzylbenzoate hydroxylase, O. sativa sa deficient 3
Protein Name CYTOCHROME P450 92A9
Allele bbh, bbh-1, bbh-2, osd3, osd3-1, osd3-2, osd3-3
Chromosome No. 9
Explanation BGIOSGA030841. cytochrome P450. cytochrome P450 71A1 in Chen et al. 2019. OsCYP71W6 in Sahoo et al. 2023.
Trait Class Biochemical character
Reproductive organ - panicle
Coloration - Anthocyanin
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK111616
MSU ID LOC_Os09g26960.1
RAP ID Os09g0441400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Odongkara P., Kang S.M., Imran M., Woo J.I., Das A.K., Yun B.W., Lee I.J.
J. Agric. Food Chem. 2026  74(1)  774-791
Nonclinical Rhizobacteria <i>Klebsiella pneumoniae</i> OC54 Degrade Glufosinate Ammonium and Modulate Resistance in <i>Oryza sativa</i> L.
Wang Y., Song S., Zhang W., Deng Q., Feng Y., Tao M., Kang M., Zhang Q., Yang L., Wang X., Zhu C., Wang X., Zhu W., Zhu Y., Cao P., Chen J., Pan J., Feng S., Chen X., Dai H., Song S., Yang J., Zhao T., Cao F., Tao Z., Shen X., Last R.L., Hu J., Yu J., Fan P., Pan R.
Nature 2025  645(8079)  208-217
Deciphering phenylalanine-derived salicylic acid biosynthesis in plants.
Zhu B., Zhang Y., Gao R., Wu Z., Zhang W., Zhang C., Zhang P., Ye C., Yao L., Jin Y., Mao H., Tou P., Huang P., Zhao J., Zhao Q., Liu C.J., Zhang K.
Nature 2025  645(8079)  218-227
Complete biosynthesis of salicylic acid from phenylalanine in plants.
Sahoo B., Nayak I., Parameswaran C., Kesawat M.S., Sahoo K.K., Subudhi H.N., Balasubramaniasai C., Prabhukarthikeyan S.R., Katara J.L., Dash S.K., Chung S.M., Siddiqui M.H., Alamri S., Samantaray S.
Plants (Basel) 2023  12(17) 
A Comprehensive Genome-Wide Investigation of the Cytochrome 71 (<i>OsCYP71</i>) Gene Family: Revealing the Impact of Promoter and Gene Variants (Ser33Leu) of <i>OsCYP71P6</i> on Yield-Related Traits in Indica Rice (<i>Oryza sativa</i> L.).
Li W., Wang L., Zhou F., Li C., Ma W., Chen H., Wang G., Pickett J.A., Zhou J.J., Lin Y.
Plant Cell Environ. 2020   
Overexpression of the homoterpene synthase gene, OsCYP92C21, increases emissions of volatiles mediating tritrophic interactions in rice.
Chen X., Tao Y., Ali A., Zhuang Z., Guo D., Guo Q., Riaz A., Zhang H., Xu P., Liao Y., Wang J., Sun C., Xiang Q., Wu X.
Int J Mol Sci 2019  20(10) 
Transcriptome and Proteome Profiling of Different Colored Rice Reveals Physiological Dynamics Involved in the Flavonoid Pathway.
Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018  675  285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to bacterium( GO:0009617 )
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen( GO:0016709 )
heme binding( GO:0020037 )
iron ion binding( GO:0005506 )
membrane( GO:0016020 )
inflorescence development( GO:0010229 )
flavonoid biosynthetic process( GO:0009813 )
response to molecule of fungal origin( GO:0002238 )
response to antibiotic( GO:0046677 )
salicylic acid mediated signaling pathway( GO:0009863 )
salicylic acid biosynthetic process( GO:0009697 )
endoplasmic reticulum( GO:0005783 )
defense response to bacterium( GO:0042742 )
Trait Ontology inflorescence development trait( TO:0000621 )
blast disease( TO:0000074 )
bacterial blight disease resistance( TO:0000175 )
Plant Ontology inflorescence development stage( PO:0001083 )
Related Strains
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Phenotype images
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Last updated
Jul 26, 2026

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