Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | _ |
| Gene Symbol Synonym | qHMS7 ORF3, S23-ORF3 |
| CGSNL Gene Name | _ |
| Gene Name Synonym | QTL for hybrid male sterility on chromosome 7 ORF3 |
| Protein Name | |
| Allele | ORF3HJX74 |
| Chromosome No. | 7 |
| Explanation | MG865763.1 (Oryza sativa), MH377757.1, MH377758.1 (Oryza rufipogon). ORF3 encodes an antidote that protects pollen in a gametophytic manner (Yu et al. 2018). one of three putative genes in S23 locus. Sequence analysis revealed that S23 was allelic with qHMS7, and S23-ORF3 was identical to qHMS7-ORF3. O. glumaepatula lacks S23-ORF3. (Fang et al. 2019). PO:0025607: vegetative shoot system. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility, hybrid weakness
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK069929
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| MSU ID |
LOC_Os07g45194.1
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| RAP ID |
Os07g0646600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Fang C., Li L., He R., Wang D., Wang M., Hu Q., Ma Q., Qin K., Feng X., Zhang G., Fu X., Liu Z.
Rice (N Y) 2019 12(1) 10 Identification of S23 causing both interspecific hybrid male sterility and environment-conditioned male sterility in rice.
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Yu X., Zhao Z., Zheng X., Zhou J., Kong W., Wang P., Bai W., Zheng H., Zhang H., Li J., Liu J., Wang Q., Zhang L., Liu K., Yu Y., Guo X., Wang J., Lin Q., Wu F., Ren Y., Zhu S., Zhang X., Cheng Z., Lei C., Liu S., Liu X., Tian Y., Jiang L., Ge S., Wu C., Tao D., Wang H., Wan J.
Science 2018 360(6393) 1130-1132 A selfish genetic element confers non-Mendelian inheritance in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
anther development( GO:0048653 )
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| Trait Ontology |
pollen abortion type( TO:0000218 )
|
| Plant Ontology |
anther development stage( PO:0001004 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| May 13, 2022 | |
