Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | ZOS9-19 |
| Gene Symbol Synonym | OsSIP1, OsSUF4, SUF4, OsZOS9-19, SIP1 |
| CGSNL Gene Name | ZINC-FINGER PROTEIN TFIIIA CLASS OF ORYZA SATIVA 9-19 |
| Gene Name Synonym | SDG723/OsTrx1/OsSET33 Interaction Protein 1, SDG723/OsTrx1 Interaction Protein 1, SUPPRESSOR OF FRI 4, zinc-finger protein TFIIIA class of Oryza sativa 9-19, ZPT of Oryza sativa 9-19 |
| Protein Name | ZINC-FINGER PROTEIN TFIIIA CLASS OF ORYZA SATIVA 9-19 |
| Allele | sip1, sip1-1, sip1-2, sip1-3 |
| Chromosome No. | 9 |
| Explanation | C2H2-type zinc finger tran- scription factor. |
| Trait Class |
Reproductive organ - Heading date
Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK067997
|
| MSU ID |
LOC_Os09g38790.1
LOC_Os09g38790.2 LOC_Os09g38790.3 |
| RAP ID |
Os09g0560900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Liu B., Liu Y., Wang B., Luo Q., Shi J., Gan J., Wen-Hui Shen, Yu Y., Dong A.
Nat Commun 2019 10(1) 2999 The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment.
|
|
|
Jiang P., Wang S., Zheng H., Li H., Zhang F., Su Y., Xu Z., Lin H., Qian Q., Ding Y.
New Phytol. 2018 219(1) 422-435 SIP1 participates in regulation of flowering time in rice by recruiting OsTrx1 to Ehd1.
|
|
|
Agarwal P., Arora R., Ray S., Ashok K Singh, Vijay P Singh, Takatsuji H., Kapoor S., Akhilesh K Tyagi
Plant Mol. Biol. 2007 65(4) 467-85 Genome-wide identification of C2H2 zinc-finger gene family in rice and their phylogeny and expression analysis.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
positive regulation of short-day photoperiodism, flowering( GO:0048576 )
positive regulation of long-day photoperiodism, flowering( GO:0048578 ) nucleus( GO:0005634 ) regulation of transcription, DNA-dependent( GO:0006355 ) DNA binding( GO:0003677 ) |
| Trait Ontology |
days to heading( TO:0000137 )
flowering time( TO:0002616 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jul 25, 2024 | |
