Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | ADL1 |
| Gene Symbol Synonym | adl1 |
| CGSNL Gene Name | ADAXIALIZED LEAF 1 |
| Gene Name Synonym | adaxialized leaf-1, ADAXIALIZED LEAF1, shootless 3, Dek1-calpain-like protein |
| Protein Name | |
| Allele | adl1, adl1-1 to adl1-3, adl1-s1, adl1-s2, adl1-g1, and adl1-g2, shl3, shl3-1, shl3-2, odm 63, odm 78 |
| Chromosome No. | 2 |
| Explanation | LOC_Os02g47970. AB477099. AY062272. It is dwarf and its leaves are rolled in reverse direction (abaxial side becomes indide) and frequently twisted. GRO:0007048; 04-stem elongation stage ; GRO:0007148; 05-booting stage ; GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling ; GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007046; 07-milk stage. a plant-specific calpain-like cysteine proteinase orthologous to maize DEFECTIVE KERNEL1. a predicted lethal-phenotype gene in Lloyd et al. 2015. |
| Trait Class |
Biochemical character
Vegetative organ - Leaf |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK121261
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| MSU ID |
LOC_Os02g47970.1
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| RAP ID |
Os02g0709400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018 9 1528 Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
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Yang S.Q., Li W.Q., Miao H., Gan P.F., Qiao L., Chang Y.L., Shi C.H., Chen K.M.
Rice (N Y) 2016 9(1) 37 rel2, A Gene Encoding An Unknown Function Protein which Contains DUF630 and DUF632 Domains Controls leaf rolling in Rice.
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Lloyd J.P., Seddon A.E., Moghe G.D., Simenc M.C., Shiu S.H.
Plant Cell 2015 Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes.
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Ken-Ichiro Hibara, Obara M., Hayashida E., Abe M., Ishimaru T., Satoh H., Jun-Ichi Itoh, Nagato Y.
Dev. Biol. 2009 334(2) 345-54 The ADAXIALIZED LEAF1 gene functions in leaf and embryonic pattern formation in rice.
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Lid,S.E., Gruis,D., Jung,R., Lorentzen,J.A., Ananiev,E., Chamberlin,M., Niu,X., Meeley,R., Nichols,S. and Olsen,O.A.
Proc. Natl. Acad. Sci. U.S.A. 2002 99(8) 5460-5465 The defective kernel 1 (dek1) gene required for aleurone cell development in the endosperm of maize grains encodes a membrane protein of the calpain gene superfamily.
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Hayashida, E., H. Satoh and Y. Nagato
RGN 2000 17 28-31 ADL genes are required for genetic control of adaxial-abaxial pattern formation in rice leaves.
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| TextPresso Search | Search textpresso for ADL1 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | GR:0060014 |
| Ontologies | |
| Gene Ontology |
multicellular organismal development( GO:0007275 )
cell fate specification( GO:0001708 ) calcium-dependent cysteine-type endopeptidase activity( GO:0004198 ) intracellular( GO:0005622 ) plasma membrane( GO:0005886 ) proteolysis( GO:0006508 ) adaxial/abaxial pattern formation( GO:0009955 ) |
| Trait Ontology |
stem length( TO:0000576 )
leaf shape( TO:0000492 ) leaf rolling( TO:0000085 ) |
| Plant Ontology |
vascular leaf( PO:0009025 )
stem( PO:0009047 ) |
| Related Strains | |
| Induced Mutation Lines(National Inst. of Genetics) | 2 |
| Lethal Embryo Mutation strain | 2 |
| Phenotype images | |
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| Last updated | |
| May 1, 2019 | |
