Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MATE34
Gene Symbol Synonym OsMATE34
CGSNL Gene Name MULTIDRUG AND TOXIC COMPOUND EXTRUSION 34
Gene Name Synonym multidrug and toxic compound extrusion 34
Protein Name MULTIDRUG AND TOXIC COMPOUND EXTRUSION 34
Allele
Chromosome No. 8
Explanation Similar to Transparent testa 12 protein. up-regulated after fertilization (Abiko et al. 2013). TO:0001109: grain color trait.
Trait Class Coloration - Anthocyanin
Biochemical character
Seed - Morphological traits
Expression
Sequence/Locus
cDNA Accession No. AK105950
MSU ID LOC_Os08g44870.1
LOC_Os08g44870.2
LOC_Os08g44870.3
RAP ID Os08g0562800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Mackon E., Ma Y., Jeazet Dongho Epse Mackon GC., Usman B., Zhao Y., Li Q., Liu P.
Genes (Basel) 2021  12(4) 
Computational and Transcriptomic Analysis Unraveled <i>OsMATE34</i> as a Putative anthocyanin transporter in Black Rice (<i>Oryza sativa</i> L.) Caryopsis.
Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013  64(7)  1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
DB Reference
Gramene ID -
Ontologies
Gene Ontology embryonic development( GO:0009790 )
antiporter activity( GO:0015297 )
drug transporter activity( GO:0015238 )
multidrug transport( GO:0006855 )
integral to membrane( GO:0016021 )
vacuole( GO:0005773 )
plasma membrane( GO:0005886 )
Trait Ontology anthocyanin content( TO:0000071 )
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Sep 10, 2021

/rice/oryzabase