Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym PEG1, OsPEG1
CGSNL Gene Name _
Gene Name Synonym paternally expressed gene1
Protein Name
Allele peg1-1, peg1-2
Chromosome No. 1
Explanation Similar to Oxidoreductase. a 2-oxoglutarate and iron-dependent oxygenase. TO:1000022: anther morphology trait. ROS1a Target gene.
Trait Class Biochemical character
Reproductive organ
Seed - Morphological traits
Seed - Physiological traits - Storage substances
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os01g08570.1
RAP ID Os01g0180900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Kim M.Y., Ono A., Scholten S., Kinoshita T., Zilberman D., Okamoto T., Fischer R.L.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(19)  9652-9657
DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm.
Yuan J., Chen S., Jiao W., Wang L., Wang L., Ye W., Lu J., Hong D., You S., Cheng Z., Yang D.L., Chen Z.J.
New Phytol. 2017   
Both maternally and paternally imprinted genes regulate seed development in rice.
Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013  64(7)  1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
DB Reference
Gramene ID -
Ontologies
Gene Ontology iron ion binding( GO:0005506 )
L-ascorbic acid binding( GO:0031418 )
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen( GO:0016705 )
Trait Ontology seed size( TO:0000391 )
seed thickness( TO:0000304 )
starch content( TO:0000696 )
Plant Ontology plant sperm cell( PO:0000084 )
endosperm( PO:0009089 )
Related Strains
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Phenotype images
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Last updated
Jan 9, 2020

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