Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PTR9
Gene Symbol Synonym OsPTR9, OsNPF8.20, NPF8.20
CGSNL Gene Name PROTEIN TRANSPORTER 9
Gene Name Synonym NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER 8.20
Protein Name PROTEIN TRANSPORTER 9
Allele osptr9, OsPTR9-1, OsPTR9-2, OsPTR9-3, OsPTR9-4
Chromosome No. 6
Explanation peptide transporter (PTR) gene family. GO:0071705: nitrogen compound transport. GO:1990573: potassium ion import across plasma membrane.
Trait Class Vegetative organ - Root
Biochemical character
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK064899
MSU ID LOC_Os06g49250.1
LOC_Os06g49250.2
LOC_Os06g49250.3
LOC_Os06g49250.4
LOC_Os06g49250.5
RAP ID Os06g0706400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhu J.N., Yu Y.J., Dai M.D., Zeng Y.L., Lu X.J., Wang L., Liu X.H., Su Z.Z., Lin F.C.
Front Microbiol 2022  13  845104
A New Species in <i>Pseudophialophora</i> From Wild Rice and Beneficial Potential.
Zhao Y., Yin Z., Wang X., Jiang C., Aslam M.M., Gao F., Pan Y., Xie J., Zhu X., Dong L., Liu Y., Zhang H., Li J., Li Z.
Sci Rep 2021  11(1)  13769
Genetic basis and network underlying synergistic roots and shoots biomass accumulation revealed by genome-wide association studies in rice.
Yang X., Xia X., Zeng Y., Nong B., Zhang Z., Wu Y., Tian Q., Zeng W., Gao J., Zhou W., Liang H., Li D., Deng G.
BMC Plant Biol. 2020  20(1)  193
Genome-wide identification of the peptide transporter family in rice and analysis of the PTR expression modulation in two near-isogenic lines with different nitrogen use efficiency.
Sophie Léran, Varala K., Jean-Christophe Boyer, Chiurazzi M., Crawford N., Françoise Daniel-Vedele, David L., Dickstein R., Fernandez E., Forde B., Gassmann W., Geiger D., Gojon A., Ji-Ming Gong, Barbara A Halkier, Jeanne M Harris, Hedrich R., Anis M Limami, Rentsch D., Seo M., Yi-Fang Tsay, Zhang M., Coruzzi G., Benoît Lacombe
Trends Plant Sci. 2014  19(1)  5-9
A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants.
Fang Z., Xia K., Yang X., Grotemeyer M.S., Meier S., Rentsch D., Xu X., Zhang M.
Plant Biotechnol. J. 2013  11(4)  446-58
Altered expression of the PTR/NRT1 homologue OsPTR9 affects nitrogen utilization efficiency, growth and grain yield in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology transporter activity( GO:0005215 )
membrane( GO:0016020 )
plasma membrane( GO:0005886 )
response to ammonium ion( GO:0060359 )
response to light stimulus( GO:0009416 )
lateral root development( GO:0048527 )
response to fungus( GO:0009620 )
Trait Ontology light sensitivity( TO:0000075 )
amino acid content( TO:0002673 )
soluble protein content( TO:0000325 )
total biomass yield( TO:0000457 )
net photosynthetic rate( TO:0001027 )
grain yield( TO:0000396 )
tiller number( TO:0000346 )
panicle number( TO:0000152 )
filled grain number( TO:0000447 )
grain number per plant( TO:0000440 )
root weight( TO:0000279 )
root length( TO:0000227 )
root development trait( TO:0000656 )
root to shoot ratio( TO:0000278 )
Plant Ontology root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Jun 27, 2022

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