Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | LBD19 |
| Gene Symbol Synonym | OsLBD37, LBD37, OsLBD3-8, LBD3-8, OsLBD19 |
| CGSNL Gene Name | LATERAL ORGAN BOUNDARIES DOMAIN 19 |
| Gene Name Synonym | LATERAL ORGAN BOUNDARIES DOMAIN 37, lateral organ boundaries domain protein 37, LBD-CONTAINING PROTEIN 37 |
| Protein Name | LATERAL ORGAN BOUNDARIES DOMAIN PROTEIN 19 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | similar to AtLBD37. OsLBD37 in Li et al. 2017, Liu et al. 2021. OsLBD3-8 in Kawai et al. 2022. GO:1901698: response to nitrogen compound. PO:0030123: panicle inflorescence. |
| Trait Class |
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity Reproductive organ - Spikelet, flower, glume, awn |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK071624
|
| MSU ID |
LOC_Os03g33090.1
|
| RAP ID |
Os03g0445700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Luo X., Wei Y., Zheng Y., Wei L., Wu F., Cai Q., Xie H., Zhang J.
BMC Plant Biol. 2023 23(1) 11 Analysis of co-expression and gene regulatory networks associated with sterile lemma development in rice.
|
|
|
Kawai T., Shibata K., Akahoshi R., Nishiuchi S., Takahashi H., Nakazono M., Kojima T., Nosaka-Takahashi M., Sato Y., Toyoda A., Lucob-Agustin N., Kano-Nakata M., Suralta R.R., Niones J.M., Chen Y., Siddique K.H.M., Yamauchi A., Inukai Y.
Proc. Natl. Acad. Sci. U.S.A. 2022 119(1) <i>WUSCHEL-related homeobox</i> family genes in rice control lateral root primordium size.
|
|
|
Liu Y., Wang H., Jiang Z., Wang W., Xu R., Wang Q., Zhang Z., Li A., Liang Y., Ou S., Liu X., Cao S., Tong H., Wang Y., Zhou F., Liao H., Hu B., Chu C.
Nature 2021 590(7847) 600-605 Genomic basis of geographical adaptation to soil nitrogen in rice.
|
|
|
Li C., Zhu S., Zhang H., Chen L., Cai M., Wang J., Chai J., Wu F., Cheng Z., Guo X., Zhang X., Wan J.
Biochem. Biophys. Res. Commun. 2017 486(3) 720-725 OsLBD37 and OsLBD38, two class II type LBD proteins, are involved in the regulation of heading date by controlling the expression of Ehd1 in rice.
|
|
|
Kong Y., Xu P., Jing X., Chen L., Li L., Li X.
BMC Genomics 2017 18(Suppl 1) 951 Decipher the ancestry of the plant-specific LBD gene family.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
floral organ development( GO:0048437 )
negative regulation of transcription, DNA-dependent( GO:0045892 ) transcription factor activity( GO:0003700 ) nucleus( GO:0005634 ) positive regulation of transcription, DNA-dependent( GO:0045893 ) rhythmic process( GO:0048511 ) photoperiodism, flowering( GO:0048573 ) regulation of photoperiodism, flowering( GO:2000028 ) |
| Trait Ontology |
days to heading( TO:0000137 )
flowering time( TO:0002616 ) yield trait( TO:0000371 ) plant height( TO:0000207 ) panicle length( TO:0000040 ) nitrogen sensitivity( TO:0000011 ) filled grain number( TO:0000447 ) |
| Plant Ontology |
lateral root primordium( PO:0000016 )
root( PO:0009005 ) leaf( PO:0025034 ) inflorescence( PO:0009049 ) seed( PO:0009010 ) carpel( PO:0009030 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Mar 19, 2025 | |
