Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | CK1A.3 |
| Gene Symbol Synonym | OsCK1a.3, UCIP10, OsUCIP10, OsCKq1, CKq1 |
| CGSNL Gene Name | CASEIN KINASE_1A.3 |
| Gene Name Synonym | CK1_CaseinKinase_1a.3, Casein Kinase_1a.3, OsUBC26 Interact Protein 10 |
| Protein Name | CASEIN KINASE_1A.3 |
| Allele | OsCKq1-GE, OsCKq1-GE0 6-4, OsCKq1-GE0 7-2, OsCKq1-GE0 14-2, OsCKq1-GE0 6-13 |
| Chromosome No. | 1 |
| Explanation | OsCKq1 in Kim et al. 2024. TO:0000934: photoperiod-sensitive flowering time trait. TO:0000975: grain width. |
| Trait Class |
Biochemical character
Reproductive organ - Heading date Seed - Morphological traits - Grain shape Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK069612
|
| MSU ID |
LOC_Os01g56580.1
LOC_Os01g56580.2 |
| RAP ID |
Os01g0772600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Kim E.G., Jang Y.H., Park J.R., Wang X.H., Jan R., Farooq M., Asaf S., Asif S., Kim K.M.
Rice (N Y) 2024 17(1) 48 OsCKq1 Regulates heading date and grain weight in Rice in Response to Day Length.
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Soni P., Shivhare R., Kaur A., Bansal S., Sonah H., Deshmukh R., Giri J., Lata C., Ram H.
J. Biotechnol. 2021 332 83-93 Reference gene identification for gene expression analysis in rice under different metal stress.
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Liu X., Song L., Zhang H., Lin Y., Shen X., Guo J., Su M., Shi G., Wang Z., Lu G.D.
Mol. Plant Pathol. 2021 22(12) 1613-1623 Rice ubiquitin-conjugating enzyme OsUBC26 is essential for immunity to the blast fungus Magnaporthe oryzae.
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Zhong X., Yang J., Shi Y., Wang X., Wang G.L.
Mol. Plant Pathol. 2017 The DnaJ protein OsDjA6 negatively regulates rice innate immunity to the blast fungus Magnaporthe oryzae.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
photoperiodism, flowering( GO:0048573 )
ATP binding( GO:0005524 ) protein serine/threonine kinase activity( GO:0004674 ) peptidyl-serine phosphorylation( GO:0018105 ) regulation of cell shape( GO:0008360 ) cytoplasm( GO:0005737 ) nucleus( GO:0005634 ) |
| Trait Ontology |
days to heading( TO:0000137 )
grain weight( TO:0000590 ) photoperiod sensitivity( TO:0000229 ) tiller number( TO:0000346 ) grain length( TO:0000734 ) 1000-seed weight( TO:0000382 ) grain yield( TO:0000396 ) panicle length( TO:0000040 ) stem length( TO:0000576 ) seed size( TO:0000391 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 21, 2024 | |
