Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SCS1
Gene Symbol Synonym OsSCS1
CGSNL Gene Name SNRK2-CALCIUM SENSOR 1
Gene Name Synonym SnRK2-calcium sensor 1
Protein Name SNRK2-CALCIUM SENSOR 1
Allele
Chromosome No. 3
Explanation LOC_Os03g14590. calcium-binding elongation factor (EF) hand family protein.
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK121051
MSU ID LOC_Os03g14590.1
LOC_Os03g14590.2
LOC_Os03g14590.3
RAP ID Os03g0250000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Holappa L.D., Ronald P.C., Kramer E.M.
Front Plant Sci 2017  8  395
Evolutionary Analysis of Snf1-Related Protein Kinase2 (SnRK2) and Calcium Sensor (SCS) Gene Lineages, and Dimerization of Rice Homologs, Suggest Deep Biochemical Conservation across Angiosperms.
Ahmed M.M.S., Ji W., Wang M., Bian S., Xu M., Wang W., Zhang J., Xu Z., Yu M., Liu Q., Zhang C., Zhang H., Tang S., Gu M., Yu H.
Gene 2017   
Transcriptional changes of rice in response to rice black-streaked dwarf virus.
DB Reference
Gramene ID -
Ontologies
Gene Ontology calcium ion binding( GO:0005509 )
nucleus( GO:0005634 )
cytosol( GO:0005829 )
response to water deprivation( GO:0009414 )
response to abscisic acid stimulus( GO:0009737 )
abscisic acid mediated signaling( GO:0009738 )
defense response to virus( GO:0051607 )
Trait Ontology abscisic acid sensitivity( TO:0000615 )
drought tolerance( TO:0000276 )
viral disease resistance( TO:0000148 )
black streak dwarf virus resistance( TO:0000020 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 14, 2018

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