Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NL1
Gene Symbol Synonym OsVTL2, VTL2, OsNL1
CGSNL Gene Name NODULIN-LIKE PROTEIN 1
Gene Name Synonym OsNodulin-like1, Nodulin-like1, vacuolar iron transporter homolog 2, Vacuolar Iron Transporter-Like 2, NODULIN-LIKE 2
Protein Name NODULIN-LIKE PROTEIN 1
Allele
Chromosome No. 4
Explanation B7F138. Vacuolar Iron Transporter/Nodulin-like family. GO:0071281: cellular response to iron ion. GO:0071421: manganese ion transmembrane transport.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK108230
MSU ID LOC_Os04g45520.1
RAP ID Os04g0538400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Shekhawat P.K., Sardar S., Yadav B., Salvi P., Soni P., Ram H.
Funct. Integr. Genomics 2023  23(4)  336
Meta-analysis of transcriptomics studies identifies novel attributes and set of genes involved in iron homeostasis in rice.
Phule A.S., Barbadikar K.M., Maganti S.M., Seguttuvel P., Subrahmanyam D., Babu MBBP., Kumar P.A.
Sci Rep 2019  9(1)  5235
RNA-seq reveals the involvement of key genes for aerobic adaptation in rice.
Denancé N., Szurek B., Noël LD.
Plant Cell Physiol. 2014  55(3)  469-74
Emerging functions of nodulin-like proteins in non-nodulating plant species.
DB Reference
Gramene ID -
Ontologies
Gene Ontology iron ion transmembrane transporter activity( GO:0005381 )
manganese ion transmembrane transporter activity( GO:0005384 )
cellular manganese ion homeostasis( GO:0030026 )
intracellular sequestering of iron ion( GO:0006880 )
integral to membrane( GO:0016021 )
membrane( GO:0016020 )
vacuolar membrane( GO:0005774 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Sep 9, 2024

/rice/oryzabase