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Basic Information
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CGSNL Gene Symbol
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NPF2.4
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Gene Symbol Synonym
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OsNPF2.4, OsPTR2, PTR2
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CGSNL Gene Name
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NRT1/PTR FAMILY 2.4
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Gene Name Synonym
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NRT1/PTR family 2.4, NO3-/peptide transporter family 2.4
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Protein Name
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NRT1/PTR FAMILY 2.4
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Allele
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npf2.4, npf2.4-1, npf2.4-2
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Chromosome No.
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3
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Explanation
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peptide transporter (PTR) gene family. GO:0035864: response to potassium ion. GO:1902025: nitrate import. osa-miR168a target gene.
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Trait Class
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Biochemical character
Seed - Physiological traits
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK099321
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MSU ID
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LOC_Os03g48180.1
LOC_Os03g48180.2
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RAP ID
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Os03g0687000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wang J., Wan R., Nie H., Xue S., Fang Z.
The Crop Journal 2022 10 397-406
OsNPF5.16, a nitrate transporter gene with natural variation, is essential for rice growth and yield
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Wang P., Yamaji N., Inoue K., Mochida K., Ma J.F.
New Phytol. 2020 226(1) 156-169
Plastic transport systems of rice for mineral elements in response to diverse soil environmental changes.
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Yang X., Xia X., Zeng Y., Nong B., Zhang Z., Wu Y., Tian Q., Zeng W., Gao J., Zhou W., Liang H., Li D., Deng G.
BMC Plant Biol. 2020 20(1) 193
Genome-wide identification of the peptide transporter family in rice and analysis of the PTR expression modulation in two near-isogenic lines with different nitrogen use efficiency.
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Neang S., Goto I., Skoulding N.S., Cartagena J.A., Kano-Nakata M., Yamauchi A., Mitsuya S.
BMC Plant Biol. 2020 20(1) 502
Tissue-specific expression analysis of Na+ and Cl- transporter genes associated with salt removal ability in rice leaf sheath.
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Zhou Y., Zhou S., Wang L., Wu D., Cheng H., Du X., Mao D., Zhang C., Jiang X.
J Integr Plant Biol 2019
miR164c and miR168a regulate seed vigor in rice.
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Xia X., Fan X., Wei J., Feng H., Qu H., Xie D., Miller A.J., Xu G.
J. Exp. Bot. 2014
Rice nitrate transporter OsNPF2.4 functions in low-affinity acquisition and long-distance transport.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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anion homeostasis( GO:0055081 )
response to flooding( GO:0009413 )
low affinity nitrate transport( GO:0080055 )
integral to membrane( GO:0016021 )
plasma membrane( GO:0005886 )
transporter activity( GO:0005215 )
response to salt stress( GO:0009651 )
sodium ion homeostasis( GO:0055078 )
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Trait Ontology
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seed viability( TO:0000345 )
salt tolerance( TO:0006001 )
potassium concentration( TO:0000513 )
potassium sensitivity( TO:0000008 )
flooding related trait( TO:0000114 )
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Plant Ontology
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epidermis( PO:0005679 )
leaf sheath( PO:0020104 )
root( PO:0009005 )
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Related Strains
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-
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Phenotype images
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Last updated
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Jul 7, 2022
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Update info.