Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PARP1
Gene Symbol Synonym OsPARP1, PARP, OsPARP1.1, OsPARP1.2
CGSNL Gene Name POLY(ADP-RIBOSE) POLYMERASE 1
Gene Name Synonym poly(ADP-ribose) polymerase 1, Poly ADP-ribose polymerase-1
Protein Name POLY(ADP-RIBOSE) POLYMERASE 1
Allele osparp1
Chromosome No. 7
Explanation Q7EYV7. PO:0030123: panicle inflorescence.
Trait Class Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Character as QTL - Germination
Expression
Sequence/Locus
cDNA Accession No. AK103479
MSU ID LOC_Os07g23110.1
RAP ID Os07g0413700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Li X., Zhang Y., Liu Q., Song S., Liu J.
Plant J. 2021   
Poly ADP-ribose polymerase-1 promotes seed-setting rate by facilitating gametophyte development and meiosis in rice (Oryza sativa L.).
He Y., Shi Y., Zhang X., Xu X., Wang H., Li L., Zhang Z., Shang H., Wang Z., Jian-Li Wu
Plant Physiol. 2020  184(1)  283-299
The OsABCI7 Transporter Interacts with OsHCF222 to Stabilize the Thylakoid Membrane in Rice.
Ishii K., Kazama Y., Morita R., Hirano T., Ikeda T., Usuda S., Hayashi Y., Ohbu S., Motoyama R., Nagamura Y., Abe T.
PLoS ONE 2016  11(7)  e0160061
Linear Energy Transfer-Dependent Change in Rice Gene Expression Profile after Heavy-Ion Beam Irradiation.
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
DNA ligase (ATP) activity( GO:0003910 )
NAD+ ADP-ribosyltransferase activity( GO:0003950 )
base-excision repair( GO:0006284 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
protein amino acid ADP-ribosylation( GO:0006471 )
lagging strand elongation( GO:0006273 )
DNA ligation during DNA repair( GO:0051103 )
zinc ion binding( GO:0008270 )
NAD or NADH binding( GO:0051287 )
pollen development( GO:0009555 )
embryo sac development( GO:0009553 )
regulation of seed germination( GO:0010029 )
protein amino acid auto-ADP-ribosylation( GO:0070213 )
flower development( GO:0009908 )
DNA repair( GO:0006281 )
DNA replication( GO:0006260 )
response to DNA damage stimulus( GO:0006974 )
positive regulation of meiotic cell cycle( GO:0051446 )
meiotic cell cycle( GO:0051321 )
gametophyte development( GO:0048229 )
Trait Ontology seed set percent( TO:0000455 )
grain yield( TO:0000396 )
flower development trait( TO:0000622 )
male sterility( TO:0000437 )
female sterility( TO:0000358 )
Plant Ontology D pollen mother cell meiosis stage( PO:0001009 )
flower development stage( PO:0007615 )
carpel( PO:0009030 )
floral organ primordium( PO:0025477 )
inflorescence( PO:0009049 )
stem( PO:0009047 )
leaf( PO:0025034 )
root( PO:0009005 )
pollen( PO:0025281 )
stamen primordium( PO:0004705 )
stamen( PO:0009029 )
gametophyte development stage( PO:0028003 )
Related Strains
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Phenotype images
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Last updated
Mar 2, 2023

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