Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol NPC1
Gene Symbol Synonym OsNPC1
CGSNL Gene Name NON-SPECIFIC PHOSPHOLIPASE C1
Gene Name Synonym Non-specific phospholipase C1
Protein Name NON-SPECIFIC PHOSPHOLIPASE C1
Allele
Chromosome No. 3
Explanation LOC_Os03g61130. GO:0071668: plant-type cell wall assembly. XB21 interacting protein (XB21IP).
Trait Class Biochemical character
Vegetative organ - Culm
Seed - Physiological traits - Shattering
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK067741
MSU ID LOC_Os03g61130.1
RAP ID Os03g0826600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Caddell D.F., Park C.J., Thomas N.C., Canlas P.E., Ronald P.C.
Rice (N Y) 2017  10(1)  23
Silencing of the Rice Gene LRR1 Compromises Rice XA21 transcript Accumulation and XA21-Mediated Immunity.
Cao H., Zhuo L., Su Y., Sun L., Wang X.
Plant J. 2016   
Non-specific phospholipase C1 affects silicon distribution and mechanical strength in stem nodes of rice.
Singh A., Kanwar P., Pandey A., Tyagi A.K., Sopory S.K., Kapoor S., Pandey G.K.
PLoS ONE 2013  8(4)  e62494
Comprehensive Genomic Analysis and Expression Profiling of Phospholipase C Gene Family during Abiotic Stresses and Development in Rice.
TextPresso Search Search textpresso for NPC1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology diacylglycerol biosynthetic process( GO:0006651 )
hydrolase activity, acting on ester bonds( GO:0016788 )
response to salt stress( GO:0009651 )
response to cold( GO:0009409 )
response to water deprivation( GO:0009414 )
cytoplasm( GO:0005737 )
Trait Ontology node shattering( TO:0000061 )
grain shattering( TO:0000473 )
acid detergent fiber( TO:0002641 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 29, 2017


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