Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol VP1
Gene Symbol Synonym Vp1* (OSVP1), OsVP1, OsVp1, Vp1, ABI3, OsABI3, OsLFL4, OsVp-1, OSVP1
Gene Name Synonym Viviparous-1, Protein viviparous homolog, B3 domain-containing protein VP1, Transcription activator VP1-rice, LEAFY COTYLEDON 2 and FUSCA 3-LIKE 4
Allele Osvp1, Osvp1-1, Osvp1-2
Chromosome No. 1
Explanation Vp1 encodes a seed-specific regulatory transcription factor. a global regulator of seed maturation. D16640. P37398. PO:0009010; seed. GRO:0007045; 09-mature grain stage. a predicted lethal-phenotype gene in Lloyd et al. 2015.
Trait Class Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Dormancy
Expression embryo - Em4 - Globular stage III
embryo - Em8 - Enlargement of organs
cDNA Accession No. AK073805
MSU ID LOC_Os01g68370.1
RAP ID Os01g0911700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Xu F., Tang J., Gao S., Cheng X., Du L., Chu C.
Plant J. 2019  100(5)  1036-1051
Control of rice pre-harvest sprouting by glutaredoxin-mediated abscisic acid signaling.
Du L., Xu F., Fang J., Gao S., Tang J., Fang S., Wang H., Tong H., Zhang F., Chu J., Wang G., Chu C.
Plant J. 2018  95(3)  545-556
Endosperm sugar accumulation caused by mutation of phs8/ISA1 leads to pre-harvest sprouting in rice.
Borah P., Sharma E., Kaur A., Chandel G., Mohapatra T., Kapoor S., Khurana J.P.
Sci Rep 2017  7  42131
Analysis of drought-responsive signalling network in two contrasting rice cultivars using transcriptome-based approach.
Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015   
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
Lloyd J.P., Seddon A.E., Moghe G.D., Simenc M.C., Shiu S.H.
Plant Cell 2015   
Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes.
Zhang Y., Miao X., Xia X., He Z.
Theor. Appl. Genet. 2014  127(4)  855-66
Cloning of seed dormancy genes (TaSdr) associated with tolerance to pre-harvest sprouting in common wheat and development of a functional marker.
Yang J., Lee S., Hang R., Kim S.R., Lee Y.S., Cao X., Amasino R., An G.
Plant J. 2013  73(4)  566-78
OsVIL2 functions with PRC2 to induce flowering by repressing OsLFL1 in rice.
Sugimoto,K., Takeuchi,Y., Ebana,K., Miyao,A., Hirochika,H., Hara,N., Ishiyama,K., Kobayashi,M., Ban,Y., Hattori,T. and Yano,M.
Proc. Natl. Acad. Sci. U.S.A. 2010  107(13)  5792-5797
Molecular cloning of Sdr4, a regulator involved in seed dormancy and domestication of rice
Shobbar ZS,Oane R,Gamuyao R,De Palma J,Malboobi MA,Karimzadeh G,Javaran MJ,Bennett J
New Phytol. 2008  178  68-79
Abscisic acid regulates gene expression in cortical fiber cells and silica cells of rice shoots.
Zou,M., Guan,Y., Ren,H., Zhang,F. and Chen,F.
Biochem. Biophys. Res. Commun. 2007  360(2)  307-313
Characterization of alternative splicing products of bZIP transcription factors OsABI5
Miyoshi, K., Y. Kagaya, Y. Ogawa, Y. Nagato and T. Hattori
Plant Cell Physiol. 2002  43  307-313.
Temporal and spatial expression pattern of the OSVP1 and OSEM genes during seed development in rice.
Hobo,T., Kowyama,Y. and Hattori,T.
Proc. Natl. Acad. Sci. U.S.A. 1999  96(26)  15348-15353
A bZIP factor, TRAB1, interacts with VP1 and mediates abscisic acid-induced transcription.
Miyoshi, K., T. Hattori and Y. Nagato
RGN 1997  14  138-141
Expression pattern of OSVP1 in developing rice seed.
Nakagawa, H., E. Ohkura, K. Ohmiya and T. Hattori
Plant Cell Physiol. 1996  37  355-362.
The seed-specific transcription factor VP1 (OSVP1) is expressed in rice suspension-cultured cells.
Hattori,T., Terada,T. and Hamasuna,S.
Plant J. 1995  7(6)  913-925
Regulation of the Osem gene by abscisic acid and the transcriptional activator VP1: analysis of cis-acting promoter elements required for regulation by abscisic acid and VP1.
Hattori,T., Terada,T. and Hamasuna,S.T.
Plant Mol. Biol. 1994  24(5)  805-810
Sequence and functional analyses of the rice gene homologous to the maize Vp1.
TextPresso Search Search textpresso for VP1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060995
Gene Ontology response to abscisic acid stimulus( GO:0009737 )
basal transcription repressor activity( GO:0017163 )
DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
abscisic acid mediated signaling( GO:0009738 )
embryonic development( GO:0009790 )
regulation of transcription( GO:0045449 )
response to water deprivation( GO:0009414 )
seed germination( GO:0009845 )
Trait Ontology vivipary( TO:0000619 )
abscisic acid sensitivity( TO:0000615 )
seed dormancy( TO:0000253 )
drought tolerance( TO:0000276 )
Plant Ontology seed( PO:0009010 )
Related Strains
Phenotype images
Last updated
Feb 10, 2020