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Basic Information
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CGSNL Gene Symbol
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RFA4
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Gene Symbol Synonym
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rfa4*, REFA4, refa4, eEF-1a, OsEF-1a, OsEF1A, EF1A, eIF-1-alpha
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CGSNL Gene Name
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ELONGATION FACTOR 1A4
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Gene Name Synonym
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rice elongation factor 1A (eEFIA)-4, rice elongation factor 1A-4, ELONGATION FACTOR 1A, Elongation factor 1-alpha, EF-1-alpha, Eukaryotic elongation factor 1-alpha, elongation factor 1 alpha
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Protein Name
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ELONGATION FACTOR 1A
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Allele
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Chromosome No.
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3
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Explanation
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O64937. GQ848073.
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Trait Class
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Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK061464
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MSU ID
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LOC_Os03g08020.1
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RAP ID
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Os03g0177500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Gu Q., Kang J., Gao S., Zhao Y., Yi H., Zha X.
Plants (Basel) 2023 12(14)
Eukaryotic Translation Elongation Factor <i>OsEF1A</i> Positively Regulates drought tolerance and Yield in Rice.
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Santos FICD., Marini N., Santos R.S.D., Hoffman B.S.F., Alves-Ferreira M., de Oliveira AC.
PLoS ONE 2018 13(3) e0193418
Selection and testing of reference genes for accurate RT-qPCR in rice seedlings under iron toxicity.
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Kang J., Li J., Gao S., Tian C., Zha X.
Plant Biotechnol. J. 2017
Overexpression of the leucine-rich receptor-like kinase gene LRK2 increases drought tolerance and tiller number in rice.
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Auler P.A., Benitez L.C., do Amaral MN., Vighi I.L., Rodrigues G.S., da Maia LC., Braga E.J.B.
Genet. Mol. Res. 2017 16(2)
Selection of candidate reference genes and validation for real-time PCR studies in rice plants exposed to low temperatures.
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Jain M, Nijhawan A, Tyagi AK, Khurana JP.
Biochem. Biophys. Res. Commun. 2006 345(2) 646-51
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.
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Li,Z.-Y. and Chen,S.-Y.
Acta Bot. Sin. 1999 41 800-806
Inducible expression of translation elongation factor 1A gene in rice seedlings in response to environmental stresses
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Kidou,S. and Ejiri,S.
Plant Mol. Biol. 1998 36(1) 137-148
Isolation, characterization and mRNA expression of four cDNAs encoding translation elongation factor 1A from rice (Oryza sativa L.).
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DB Reference
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Gramene ID
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GR:0060752
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Ontologies
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Gene Ontology
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water homeostasis( GO:0030104 )
cytoskeleton( GO:0005856 )
nucleus( GO:0005634 )
membrane( GO:0016020 )
response to oxidative stress( GO:0006979 )
response to osmotic stress( GO:0006970 )
response to water deprivation( GO:0009414 )
translational initiation( GO:0006413 )
translational elongation( GO:0006414 )
translation elongation factor activity( GO:0003746 )
GTPase activity( GO:0003924 )
GTP binding( GO:0005525 )
cytoplasm( GO:0005737 )
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Trait Ontology
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drought tolerance( TO:0000276 )
osmotic response sensitivity( TO:0000095 )
oxidative stress( TO:0002657 )
yield trait( TO:0000371 )
tillering ability( TO:0000329 )
tiller number( TO:0000346 )
grain number per plant( TO:0000440 )
grain yield( TO:0000396 )
relative water content( TO:0000136 )
proline content( TO:0006002 )
leaf rolling tolerance( TO:0002662 )
plant height( TO:0000207 )
1000-seed weight( TO:0000382 )
seed set percent( TO:0000455 )
primary branch number( TO:0000547 )
secondary branch number( TO:0000557 )
inflorescence branching( TO:0000050 )
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Plant Ontology
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root( PO:0009005 )
stem node( PO:0020141 )
anther( PO:0009066 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Nov 14, 2023
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Update info.