Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RAD
Gene Symbol Synonym rad,rad*, OsRAD, GEN1, OsGEN-L, OsGEN1
CGSNL Gene Name REDUCED ADH ACTIVITY
Gene Name Synonym reduced ADH activity, Flap endonuclease GEN-like 1, Protein OsGEN-like, OsGEN-like
Protein Name FLAP ENDONUCLEASE GEN-LIKE 1
Allele osgen1
Chromosome No. 9
Explanation EC=3.1.-.- Q64MA3. AB158320, AB194139. PO:0009011; plant structure ; PO:0000003; whole plant. PO:0006452; microspore (sensu Poaceae) ; PO:0009005; root ; PO:0009025; leaf. GRO:0007018; 4.01-pollen development. Yen1/GEN1 ortholog in rice.
Trait Class Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Expression
Sequence/Locus
cDNA Accession No. AK063534
MSU ID LOC_Os09g35000.1
RAP ID Os09g0521900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Zhang J., Wang C., Higgins J.D., Kim Y.J., Moon S., Jung K.H., Qu S., Liang W.
Plant Physiol. 2019  181(1)  221-235
A Multiprotein Complex Regulates Interference-Sensitive Crossover Formation in Rice.
Wang C., Higgins J.D., He Y., Lu P., Zhang D., Liang W.
Plant Physiol. 2017  173(2)  1316-1329
Resolvase OsGEN1 Mediates DNA Repair by Homologous Recombination.
Yang Y., Ishino S., Yamagami T., Kumamaru T., Satoh H., Ishino Y.
J. Biochem. 2012  151(3)  317-27
The OsGEN-L protein from Oryza sativa possesses Holliday junction resolvase activity as well as 5'-flap endonuclease activity.
Saika H, Matsumura H, Takano T, Tsutsumi N, Nakazono M.
Breeding Science 2006  56(1)  69-74
A Point Mutation of Adh1 Gene is Involved in the Repression of Coleoptile Elongation under Submergence in Rice
Moritoh,S., Miki,D., Akiyama,M., Kawahara,M., Izawa,T., Maki,H. and Shimamoto,K.
Plant Cell Physiol. 2005  46(5)  699-715
RNAi-mediated Silencing of OsGEN-L (OsGEN-like), a New Member of the RAD2/XPG Nuclease Family, Causes Male Sterility by Defect of Microspore Development in Rice.
Matsumura, H., T. Takano, G. Takeda and H. Uchimiya
Breeding Science 1998  48(Suppl. 2)  295
Expression of Adh genes in a rice mutant with reduced ADH activity.
Matsumura, H., T. Takano, G. Takeda and H. Uchimiya
Theor. Appl. Genet. 1998  97  1197-1203
Adh1 is transcriptionally active but its translational product is reduced in a rad mutant of rice (Oryza sativa L.), which is vulnerable to submergence stress.
TextPresso Search Search textpresso for RAD ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080026
Ontologies
Gene Ontology magnesium ion binding( GO:0000287 )
alcohol dehydrogenase (NAD) activity( GO:0004022 )
nucleus( GO:0005634 )
DNA repair( GO:0006281 )
single-stranded DNA binding( GO:0006330 )
double-stranded DNA binding( GO:0003690 )
single-stranded DNA binding( GO:0003697 )
resolution of meiotic joint molecules as recombinants( GO:0000712 )
double-strand break repair via homologous recombination( GO:0000724 )
DNA replication( GO:0006260 )
double-strand break repair( GO:0006302 )
meiosis( GO:0007126 )
synaptonemal complex assembly( GO:0007130 )
pollen development( GO:0009555 )
microsporogenesis( GO:0009556 )
flap endonuclease activity( GO:0048256 )
Trait Ontology aborted uni-nucleate stage( TO:0000060 )
pollen sterility( TO:0000053 )
male sterility( TO:0000437 )
Plant Ontology whole plant( PO:0000003 )
microspore( PO:0020048 )
root( PO:0009005 )
plant structure( PO:0009011 )
vascular leaf( PO:0009025 )
Related Strains
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Phenotype images
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Last updated
Mar 4, 2020


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