Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PSH1 |
| Gene Symbol Synonym | Rb, Rb*, bhlh165, OsbHLH165, Rb2, OsPSH1, OsRb2 |
| CGSNL Gene Name | PURPLE LEAF SHEATH 1 |
| Gene Name Synonym | Rice R gene : b R gene family, Rice R gene-b, basic/helix-loop-helix 165, basic helix loop helix 165, purple leaf sheath 1 |
| Protein Name | TRANSCRIPTIONAL ACTIVATOR B |
| Allele | |
| Chromosome No. | 1 |
| Explanation | U39866 (Genetics. 1996 Mar;142(3):1021-31.). GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage. |
| Trait Class |
Coloration - Anthocyanin
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os01g39580.1
|
| RAP ID |
Os01g0577300 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Hu W., Zhou T., Han Z., Tan C., Xing Y.
Theor. Appl. Genet. 2020 Dominant complementary interaction between OsC1 and two tightly linked genes, Rb1 and Rb2, controls the purple leaf sheath in rice.
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Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006 141(4) 1167-84 Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
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Hu J, Reddy VS, Wessler SR.
Plant Mol. Biol. 2000 42(5) 667-678 The rice R gene family: two distinct subfamilies containing several miniature inverted-repeat transposable elements.
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Hu,J., Anderson,B. and Wessler,S.R.
Genetics 1996 142(3) 1021-1031 Isolation and characterization of rice R genes: evidence for distinct evolutionary paths in rice and maize.
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| DB Reference | |
| Gramene ID | GR:0060720 |
| Ontologies | |
| Gene Ontology |
seed maturation( GO:0010431 )
regulation of transcription( GO:0045449 ) nucleus( GO:0005634 ) mitochondrion( GO:0005739 ) flavonoid metabolic process( GO:0009812 ) transcription regulator activity( GO:0030528 ) |
| Trait Ontology |
seed coat color( TO:0000190 )
endosperm color( TO:0000487 ) leaf sheath color( TO:0002724 ) anthocyanin content( TO:0000071 ) seed maturation( TO:0002661 ) |
| Plant Ontology |
seed coat( PO:0009088 )
endosperm( PO:0009089 ) seed maturation stage( PO:0007632 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Sep 29, 2020 | |
