Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PSH1
Gene Symbol Synonym Rb, Rb*, bhlh165, OsbHLH165, Rb2, OsPSH1, OsRb2
CGSNL Gene Name PURPLE LEAF SHEATH 1
Gene Name Synonym Rice R gene : b R gene family, Rice R gene-b, basic/helix-loop-helix 165, basic helix loop helix 165, purple leaf sheath 1
Protein Name TRANSCRIPTIONAL ACTIVATOR B
Allele
Chromosome No. 1
Explanation U39866 (Genetics. 1996 Mar;142(3):1021-31.). GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage.
Trait Class Coloration - Anthocyanin
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os01g39580.1
RAP ID Os01g0577300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Hu W., Zhou T., Han Z., Tan C., Xing Y.
Theor. Appl. Genet. 2020   
Dominant complementary interaction between OsC1 and two tightly linked genes, Rb1 and Rb2, controls the purple leaf sheath in rice.
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, Guo J, Liang W, Chen L, Yin J, Ma H, Wang J, Zhang D.
Plant Physiol. 2006  141(4)  1167-84
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
Hu J, Reddy VS, Wessler SR.
Plant Mol. Biol. 2000  42(5)  667-678
The rice R gene family: two distinct subfamilies containing several miniature inverted-repeat transposable elements.
Hu,J., Anderson,B. and Wessler,S.R.
Genetics 1996  142(3)  1021-1031
Isolation and characterization of rice R genes: evidence for distinct evolutionary paths in rice and maize.
TextPresso Search Search textpresso for PSH1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060720
Ontologies
Gene Ontology seed maturation( GO:0010431 )
regulation of transcription( GO:0045449 )
nucleus( GO:0005634 )
mitochondrion( GO:0005739 )
flavonoid metabolic process( GO:0009812 )
transcription regulator activity( GO:0030528 )
Trait Ontology seed coat color( TO:0000190 )
endosperm color( TO:0000487 )
leaf sheath color( TO:0002724 )
anthocyanin content( TO:0000071 )
seed maturation( TO:0002661 )
Plant Ontology seed coat( PO:0009088 )
endosperm( PO:0009089 )
seed maturation stage( PO:0007632 )
Related Strains
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Phenotype images
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Last updated
Sep 29, 2020


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