Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PDC3
Gene Symbol Synonym pdc3*, pdc3, OsPDC3, OsSTA202
CGSNL Gene Name PYRUVATE DECARBOXYLASE 3
Gene Name Synonym pyruvate decarboxylase-3, pyruvate decarboxylase 3, Pyruvate decarboxylase isozyme 3
Protein Name PYRUVATE DECARBOXYLASE 3
Allele
Chromosome No. 7
Explanation This gene is located to the bottom of chromosome 7 distal to RFLP marker RG351. EC=4.1.1.1 A2YQ76(indica). Q0D3D2(japonica). U07338. LOC_Os07g49250. a mature anther-preferentially expressed gene. AB111050.
Trait Class Biochemical character
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK100433
MSU ID LOC_Os07g49250.1
RAP ID Os07g0693100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Ling S., Chen C., Wang Y., Sun X., Lu Z., Ouyang Y., Yao J.
BMC Genomics 2015  16  101
The mature anther-preferentially expressed genes are associated with pollen fertility, pollen germination and anther dehiscence in rice.
Li,Y., Ohtsu,K., Nemoto,K., Tsutsumi,N., Hirai,A. and Nakazono,M.
J. Exp. Bot. 2004  55(394)  145-146
The rice pyruvate decarboxylase 3 gene, which lacks introns, is transcribed in mature pollen
Sugimori,M., Kiribuchi,K., Akimoto,C., Yamaguchi,T., Minami,E., Shibuya,N., Sobajima,H., Cho,E.M., Kobashi,N., Nojiri,H., Omori,T., Nishiyama,M. and Yamane,H.
Biosci. Biotechnol. Biochem. 2002  66(5)  1140-1142
Cloning and characterization of cDNAs for the jasmonic acid-responsive Genes RRJ1 and RRJ2 in suspension-cultured rice cells.
Huq, E., S. Harrington, M.A. Hossain, F. Wen, S.R. McCouch and T.K. Hodges
Theor. Appl. Genet. 1999  98  815-824
Molecular characterization of pdc2 and mapping of three pdc genes from rice.
Hossain,M.A., Huq,E., Grover,A., Dennis,E.S., Peacock,W.J. and Hodges,T.K.
Plant Mol. Biol. 1996  31(4)  761-770
Characterization of pyruvate decarboxylase genes from rice.
Hossain,M.A., McGee,J.D., Grover,A., Dennis,E.S., Peacock,W.J., Hodges,T.K. and E.S.].
Plant Physiol. 1994  106(4)  1697-1698
Nucleotide sequence of a rice genomic pyruvate decarboxylase gene that lacks introns: a pseudo-gene?
DB Reference
Gramene ID GR:0060609
Ontologies
Gene Ontology pyruvate decarboxylase activity( GO:0004737 )
magnesium ion binding( GO:0000287 )
thiamin pyrophosphate binding( GO:0030976 )
alcohol metabolic process( GO:0006066 )
Trait Ontology -
Plant Ontology anther( PO:0009066 )
pollen( PO:0025281 )
inflorescence( PO:0009049 )
Related Strains
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Phenotype images
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Last updated
Nov 16, 2015

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