Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PDC2
Gene Symbol Synonym pdc2*, pdc2
CGSNL Gene Name PYRUVATE DECARBOXYLASE 2
Gene Name Synonym pyruvate decarboxylase-2, Pyruvate decarboxylase isozyme 2
Protein Name PYRUVATE DECARBOXYLASE 2
Allele
Chromosome No. 3
Explanation This gene encodes the first enzyme of anaerobic fermentation pathway, which plays an important role under flooding conditions. This is located between two RFLP markers, RZ329 and RZ313 on chromosome 3. EC=4.1.1.1 A2XFI3(indica). Q10MW3(japonica). U27350. LOC_Os03g18220.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK119500
MSU ID LOC_Os03g18220.1
LOC_Os03g18220.2
RAP ID Os03g0293500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Hwang S.T., Choi D.
Plant Cell Rep. 2016   
A novel rice protein family of OsHIGDs may be involved in early signalling of hypoxia-promoted stem growth in deepwater rice.
Song Y.a, Cui J.a, Zhang H.b, Wang G.a, Zhao F.J.c, Shen Z.a
Plant Soil 2013  366  647-658
Proteomic analysis of copper stress responses in the roots of two rice (Oryza sativa L.) varieties differing in Cu tolerance
Sauter,M., Rzewuski,G., Marwedel,T. and Lorbiecke,R.
J. Exp. Bot. 2002  53(379)  2325-2331
The novel ethylene-regulated gene OsUsp1 from rice encodes a member of a plant protein family related to prokaryotic universal stress proteins.
Sugimori,M., Kiribuchi,K., Akimoto,C., Yamaguchi,T., Minami,E., Shibuya,N., Sobajima,H., Cho,E.M., Kobashi,N., Nojiri,H., Omori,T., Nishiyama,M. and Yamane,H.
Biosci. Biotechnol. Biochem. 2002  66(5)  1140-1142
Cloning and characterization of cDNAs for the jasmonic acid-responsive Genes RRJ1 and RRJ2 in suspension-cultured rice cells.
Huq, E., S. Harrington, M.A. Hossain, F. Wen, S.R. McCouch and T.K. Hodges
Theor. Appl. Genet. 1999  98  815-824
Molecular characterization of pdc2 and mapping of three pdc genes from rice.
Hossain,M.A., Huq,E., Grover,A., Dennis,E.S., Peacock,W.J. and Hodges,T.K.
Plant Mol. Biol. 1996  31(4)  761-770
Characterization of pyruvate decarboxylase genes from rice.
Huq,M.E., Hossain,M.A. and Hodges,T.K.
Plant Physiol. 1995  109(2)  722
Cloning and sequencing of a cDNA encoding pyruvate decarboxylase 2 gene (Accession No. U27350) from rice (PGR95-072)
TextPresso Search Search textpresso for PDC2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060608
Ontologies
Gene Ontology pyruvate decarboxylase activity( GO:0004737 )
magnesium ion binding( GO:0000287 )
thiamin pyrophosphate binding( GO:0030976 )
response to copper ion( GO:0046688 )
Trait Ontology copper sensitivity( TO:0000021 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 10, 2018


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