Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | GATA12 |
| Gene Symbol Synonym | OsGATA12 |
| CGSNL Gene Name | GATA TRANSCRIPTION FACTOR 12 |
| Gene Name Synonym | GATA transcription factor 12, GATA factor 12 |
| Protein Name | GATA TRANSCRIPTION FACTOR 12 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | LOC_Os03g61570. GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding. GO:0001085 RNA polymerase II transcription factor binding. GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding. TO:0000905: seed yield. |
| Trait Class |
Vegetative organ - Root
Coloration - Chlorophyll Vegetative organ - Culm Character as QTL - Yield and productivity Reproductive organ - Heading date Other Vegetative organ - Leaf |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK073709
|
| MSU ID |
LOC_Os03g61570.1
LOC_Os03g61570.2 |
| RAP ID |
Os03g0831200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Lu G., Casaretto J.A., Ying S., Mahmood K., Liu F., Bi Y.M., Rothstein S.J.
Plant Mol. Biol. 2017 Overexpression of OsGATA12 regulates chlorophyll content, delays plant senescence and improves rice yield under high density planting.
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Gupta P., Nutan K.K., Singla-Pareek SL., Pareek A.
Front Plant Sci 2017 8 1944 Abiotic Stresses Cause Differential Regulation of Alternative Splice Forms of GATA Transcription Factor in Rice.
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Behringer C., Schwechheimer C.
Front Plant Sci 2015 6 90 B-GATA transcription factors - insights into their structure, regulation, and role in plant development.
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José C Reyes, M Isabel Muro-Pastor, Francisco J Florencio
Plant Physiol. 2004 134(4) 1718-32 The GATA family of transcription factors in Arabidopsis and rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
chromatin binding( GO:0003682 )
nucleus( GO:0005634 ) transcription factor complex( GO:0005667 ) transcription from RNA polymerase II promoter( GO:0006366 ) zinc ion binding( GO:0008270 ) chloroplast organization( GO:0009658 ) leaf senescence( GO:0010150 ) chlorophyll biosynthetic process( GO:0015995 ) chlorophyll catabolic process( GO:0015996 ) cell differentiation( GO:0030154 ) positive regulation of transcription from RNA polymerase II promoter( GO:0045944 ) root development( GO:0048364 ) photoperiodism, flowering( GO:0048573 ) cell division( GO:0051301 ) |
| Trait Ontology |
leaf senescence( TO:0000249 )
yield trait( TO:0000371 ) leaf color( TO:0000326 ) leaf number( TO:0000241 ) tiller number( TO:0000346 ) harvest index( TO:0000128 ) chlorophyll content( TO:0000495 ) total biomass yield( TO:0000457 ) days to flower( TO:0000344 ) flowering time( TO:0002616 ) amino acid content( TO:0002673 ) starch concentration( TO:0000702 ) total soluble sugar content( TO:0000340 ) root development trait( TO:0000656 ) root length( TO:0000227 ) root number( TO:0000084 ) plant height( TO:0000207 ) seed number( TO:0000445 ) grain yield per plant( TO:0000449 ) chloroplast development trait( TO:0002715 ) |
| Plant Ontology |
4 leaf senescence stage( PO:0001054 )
4 root elongation stage( PO:0001031 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jul 5, 2018 | |
