Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HSA1B |
| Gene Symbol Synonym | hsa1(t), s(t), hst49, OsHSA1B |
| CGSNL Gene Name | F2 STERILITY-1 |
| Gene Name Synonym | F2 sterility-1(t) |
| Protein Name | |
| Allele | hsa1-IR |
| Chromosome No. | 12 |
| Explanation | This gene causes F2 sterility complementarily with hsa2(t) in the cross between japonica and indica cross. hsa1 locus contains two interacting genes, HSA1a and HSA1b, within a 30-kb region (Kubo et al. 2016). LC026149(cDNA accession, IR24, indica) and LC026150(cDNA accession, Asomidori, japonica). |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os12g39920
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| RAP ID |
Os12g0589700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Huang J., Qiao Z., Yu H., Lu Z., Chen W., Lu J., Wu J., Bao Y., Shahid M.Q., Liu X.
J. Exp. Bot. 2024 OsRH52A, a DEAD-Box protein, is required for embryo sac development by regulating functional megaspore specification in rice.
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Kubo T., Takashi T., Ashikari M., Yoshimura A., Kurata N.
Mol Plant 2016 9 221-232 Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 hybrid sterility in Rice.
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Kubo, T. and A. Yoshimura
Theor. Appl. Genet. 2005 110 (2) 346-355 Epistasis underlying female sterility detected in hybrid breakdown in a Japonica-Indica cross of rice (Oryza sativa L.).
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Kubo, T, and A. Yoshimura
RGN 1999 16 68-70. Complementary genes causing F2 sterility in Japonica/Indica cross of rice.
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Kubo, T. and A. Yoshimura
RGN 1998 15 149-151 Linkage analysis of a gene controlling F2 sterility in Japonica/Indica backcrossed progenies of rice.
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| DB Reference | |
| Gramene ID | GR:0061092 |
| Ontologies | |
| Gene Ontology |
multicellular organismal development( GO:0007275 )
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| Trait Ontology |
f2-generation sterility( TO:0000046 )
f1-hybrid incompatibility( TO:0000042 ) |
| Plant Ontology |
flower( PO:0009046 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Oct 3, 2024 | |
