Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | ATM |
| Gene Symbol Synonym | OsATM |
| CGSNL Gene Name | ATAXIA TELANGIECTASIA-MUTATED GENE |
| Gene Name Synonym | ATM homolog, ATR-mediated signaling response |
| Protein Name | ATAXIA TELANGIECTASIA-MUTATED PROTEIN |
| Allele | Osatm, Osatm-1, Osatm-2, Osatm-3 |
| Chromosome No. | 1 |
| Explanation | phosphatidylinositol 3- and 4-kinase family protein. an OsAM1-responsive rice meiotic gene. GO:0090399: replicative senescence. GO:1990918: double-strand break repair involved in meiotic recombination. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os01g01689.1
LOC_Os01g01689.3 |
| RAP ID |
Os01g0106700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Zhang C., Zhang F., Cheng X., Liu K., Tang J., Li Y., Tang D., Cheng Z., Yu H.
Plant Physiol. 2020 183(3) 1047-1057 OsATM Safeguards Accurate Repair of Meiotic Double-Strand Breaks in Rice.
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He Y., Shi Y., Zhang X., Xu X., Wang H., Li L., Zhang Z., Shang H., Wang Z., Jian-Li Wu
Plant Physiol. 2020 184(1) 283-299 The OsABCI7 Transporter Interacts with OsHCF222 to Stabilize the Thylakoid Membrane in Rice.
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Zhang B., Xu M., Bian S., Hou L., Tang D., Li Y., Gu M., Cheng Z., Yu H.
PLoS ONE 2015 10(9) e0137399 Global Identification of Genes Specific for Rice Meiosis.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
DNA damage checkpoint( GO:0000077 )
telomere maintenance( GO:0000723 ) double-strand break repair via homologous recombination( GO:0000724 ) protein serine/threonine kinase activity( GO:0004674 ) ATP binding( GO:0005524 ) meiosis( GO:0007126 ) response to ionizing radiation( GO:0010212 ) kinase activity( GO:0016301 ) histone phosphorylation( GO:0016572 ) double-strand break repair( GO:0006302 ) response to DNA damage stimulus( GO:0006974 ) |
| Trait Ontology |
starch content( TO:0000696 )
pollen sterility( TO:0000053 ) grain number( TO:0002759 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 26, 2021 | |
