Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SLC1
Gene Symbol Synonym OsSLC1, GA20OX7, OsGA20ox7, ga20ox7, 2-ODD4, Os2-ODD4, 2ODD4, Os2ODD4, PH8, OsPH8
CGSNL Gene Name SLENDER AND CRINKLY LEAF 1
Gene Name Synonym GIBBERELLIN 20-OXIDASE 7, rice GA 20-oxidase7, GA 20-oxidase 7, gibberellin C-20 oxidase 7, Gibberellin-20 oxidase 7, 2-oxoglutarate-dependent dioxygenase 4, gibberellin 20 oxidase 2, Plant Height 8
Protein Name GIBBERELLIN 20-OXIDASE 7
Allele slc1, slc1-4, slc1-7, ph8, ph8-1, ph8-2
Chromosome No. 8
Explanation gibberellin 20 oxidase 2 in Ma et al. 2023. PO:0025570: vascular leaf development stage. TO:0000748: leaf morphology trait. TO:0000905: seed yield trait. GO:2000296: negative regulation of hydrogen peroxide catabolic process. GO:2000377: regulation of reactive oxygen species metabolic process. GO:0098869: cellular oxidant detoxification. PO:0030117: spike inflorescence.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Seed
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK107230
MSU ID LOC_Os08g44590.1
RAP ID Os08g0560000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Chen C., Zhang X., Chen J., Xu M., Zhao W., Wang Y., Chen Z., Xiong J., Yuan H., Chen W., Tu B., Li T., Kang L., Tang S., Wang Y., Ma B., Li S., Qin P.
Rice (N Y) 2025  18(1)  35
Natural Variation of PH8 Allele Improves Architecture and cold tolerance in Rice.
Ma Q., Wang F., Song W., Huang C., Xie K., Wei Z., Li Y., Chen J., Zhang H., Sun Z.
Front Microbiol 2023  14  1131212
Transcriptome analysis of auxin transcription factor OsARF17-mediated rice stripe mosaic virus response in rice.
Liu X., Wen-Jing Cai, Yin X., Yang D., Dong T., Yu-Qi Feng, Wu Y.
J. Exp. Bot. 2019   
Two dioxygenases, slc1 and SLC2, play essential roles in shoot development of rice.
Byeon Y., Back K.
J. Pineal Res. 2015  58(3)  343-51
Molecular cloning of melatonin 2-hydroxylase responsible for 2-hydroxymelatonin production in rice (Oryza sativa).
Schmitz A.J., Begcy K., Sarath G., Walia H.
Plant Sci. 2015  241  177-88
Rice Ovate Family Protein 2 (OFP2) alters hormonal homeostasis and vasculature development.
DB Reference
Gramene ID -
Ontologies
Gene Ontology oxidoreductase activity( GO:0016491 )
metal ion binding( GO:0046872 )
gibberellin biosynthetic process( GO:0009686 )
shoot development( GO:0048367 )
salicylic acid biosynthetic process( GO:0009697 )
root development( GO:0048364 )
leaf development( GO:0048366 )
seed development( GO:0048316 )
defense response to virus( GO:0051607 )
response to cold( GO:0009409 )
hydrogen peroxide catabolic process( GO:0042744 )
cytoplasm( GO:0005737 )
nucleus( GO:0005634 )
negative regulation of transcription, DNA-dependent( GO:0045892 )
Trait Ontology gibberellic acid content( TO:0002675 )
root length( TO:0000227 )
plant height( TO:0000207 )
leaf width( TO:0000370 )
leaf number( TO:0000241 )
leaf development trait( TO:0000655 )
viral disease resistance( TO:0000148 )
cold tolerance( TO:0000303 )
hydrogen peroxide content( TO:0000605 )
Plant Ontology shoot system development stage( PO:0025527 )
4 root elongation stage( PO:0001031 )
seed development stage( PO:0001170 )
root( PO:0009005 )
leaf sheath( PO:0020104 )
stem( PO:0009047 )
root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Sep 27, 2025

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