Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PIMT1 |
| Gene Symbol Synonym | OsPIMT1, OsPIMT1' |
| CGSNL Gene Name | PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 1 |
| Gene Name Synonym | Protein repair L-isoaspartyl methyltransferase 1, PROTEIN L-ISOASPARTYL O-METHYLTRANSFERASE 1, L-isoaspartylmethyltransferase 1 |
| Protein Name | PROTEIN REPAIR L-ISOASPARTYL METHYLTRANSFERASE 1 |
| Allele | |
| Chromosome No. | 8 |
| Explanation | KM527502. GO:2000377 regulation of reactive oxygen species metabolic process. TO:0000931: seed quality trait. |
| Trait Class |
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Longevity Seed - Physiological traits Character as QTL - Grain quality Biochemical character |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK100496
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| MSU ID |
LOC_Os08g44280.1
LOC_Os08g44280.2 |
| RAP ID |
Os08g0557000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Kamble N.U., Ghosh S., Petla B.P., Achary R.K., Gautam S., Rao V., Salvi P., Hazra A., Varshney V., Majee M.
Plant J. 2024 119(1) 413-431 PROTEIN L-ISOASPARTYL METHYLTRANSFERASE protects enolase dysfunction by repairing isoaspartyl-induced damage and is positively implicated in agronomically important seed traits.
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Wu F., Luo X., Wang L., Wei Y., Li J., Xie H., Zhang J., Xie G.
Plants (Basel) 2021 10(4) Genome-Wide Association Study Reveals the QTLs for Seed Storability in World Rice Core Collections.
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Petla B.P., Kamble N.U., Kumar M., Verma P., Ghosh S., Singh A., Rao V., Salvi P., Kaur H., Saxena S.C., Majee M.
New Phytol. 2016 Rice PROTEIN l-ISOASPARTYL METHYLTRANSFERASE isoforms differentially accumulate during seed maturation to restrict deleterious isoAsp and reactive oxygen species accumulation and are implicated in seed vigor and longevity.
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Wei Y., Xu H., Diao L., Zhu Y., Xie H., Cai Q., Wu F., Wang Z., Zhang J., Xie H.
Plant Mol. Biol. 2015 89(4-5) 475-92 Protein repair l -isoaspartyl methyltransferase 1 (PIMT1) in rice improves seed longevity by preserving embryo vigor and viability.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity( GO:0004719 )
cytosol( GO:0005829 ) protein repair( GO:0030091 ) seed development( GO:0048316 ) response to abscisic acid stimulus( GO:0009737 ) seed germination( GO:0009845 ) aging( GO:0007568 ) cytoplasm( GO:0005737 ) |
| Trait Ontology |
seed longevity( TO:0000435 )
germination rate( TO:0000430 ) seed development trait( TO:0000653 ) abscisic acid sensitivity( TO:0000615 ) seed viability( TO:0000345 ) seed size( TO:0000391 ) seed weight( TO:0000181 ) seed length( TO:0000146 ) seed width( TO:0000149 ) |
| Plant Ontology |
plant embryo( PO:0009009 )
seed development stage( PO:0001170 ) 0 seed germination stage( PO:0007057 ) endosperm( PO:0009089 ) seed maturation stage( PO:0007632 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| Mar 2, 2026 | |
