Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GLB1
Gene Symbol Synonym glb1(t)*, glb1(t), glb1, alpha-Glb, Glb-1, OsGlb1, Glb, OsEnS-77
CGSNL Gene Name LACK OF ALPHA-GLOBULIN
Gene Name Synonym lack of alpha-globulin, alpha-globulin, 26 kDa globulin, 19 kDa globulin, 19kD globulin, endosperm-specific gene 77, Globulin23
Protein Name ALPHA-GLOBULIN
Allele
Chromosome No. 5
Explanation Lacks alpha-globulin in a seed protein. PO:0009010; seed. D50643. P29835. AY427575(promoter region). X63990. L12252. Globulin23 in Huang et al. 2016.
Trait Class Seed - Morphological traits - Embryo
Seed - Physiological traits - Storage substances
Expression
Sequence/Locus
cDNA Accession No. AK242943
MSU ID LOC_Os05g41970.1
RAP ID Os05g0499100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Wang J., Chen Z., Zhang Q., Meng S., Wei C.
Plant Physiol. 2020  184(4)  1775-1791
The NAC Transcription Factors OsNAC20 and OsNAC26 Regulate Starch and Storage Protein Synthesis.
Yang Y., Chou H.L., Crofts A.J., Zhang L., Tian L., Washida H., Fukuda M., Kumamaru T., Oviedo O.J., Starkenburg S.R., Okita T.W.
J. Exp. Bot. 2018  69(21)  5045-5058
Selective sets of mRNAs localize to extracellular paramural bodies in a rice glup6 mutant.
Kim J.S., Chae S., Jun K.M., Pahk Y.M., Lee T.H., Chung P.J., Kim Y.K., Nahm B.H.
Rice (N Y) 2017  10(1)  16
Genome-wide identification of grain filling genes regulated by the OsSMF1 transcription factor in rice.
Huang X., Lu Z., Wang X., Ouyang Y., Chen W., Xie K., Wang D., Luo M., Luo J., Yao J.
Plant J. 2016   
Imprinted gene OsFIE1 modulates rice seed development by influencing nutrient metabolism and modifying genome H3K27me3.
Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013  530(2)  236-47
Genome-wide analysis of endosperm-specific genes in rice.
Masuda H., Ishimaru Y., Aung M.S., Kobayashi T., Kakei Y., Takahashi M., Higuchi K., Nakanishi H., Nishizawa N.K.
Sci Rep 2012  2  543
Iron biofortification in rice by the introduction of multiple genes involved in iron nutrition.
Onda Y,Nagamine A,Sakurai M,Kumamaru T,Ogawa M,Kawagoe Y
Plant Cell 2011  23(1)  210-23
Distinct Roles of Protein Disulfide Isomerase and P5 Sulfhydryl Oxidoreductases in Multiple Pathways for Oxidation of Structurally Diverse Storage Proteins in Rice.
Wakasa Y,Yasuda H,Oono Y,Kawakatsu T,Hirose S,Takahashi H,Hayashi S,Yang L,Takaiwa F
Plant J. 2010  65(5)  675-89
Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
Kawagoe Y., Suzuki K., Tasaki M., Yasuda H., Akagi K., Katoh E., Naoko K Nishizawa, Ogawa M., Takaiwa F.
Plant Cell 2005  17(4)  1141-53
The critical role of disulfide bond formation in protein sorting in the endosperm of rice.
Qu,L.Q. and Takaiwa,F.
Plant Biotechnol J. 2004  2(2)  113-125
Evaluation of tissue specificity and expression strength of rice seed component gene promoters in transgenic rice
Wu, C.Y., T. Adachi, T. Hatano, H. Washida, A. Suzuki and F. Takaiwa
Plant Cell Physiol. 1998  39  885-889.
Promoters of rice seed storage protein genes direct endosperm-specific gene expression in transgenic rice.
Iida, S., K. Miyahara and T. Nishio
Breeding Science 1998  48  45-49.
Rice mutant lines lacking alpha-globulin.
Nakase,M., Hotta,H., Adachi,T., Aoki,N., Nakamura,R., Masumura,T., Tanaka,K. and Matsuda,T.
Gene 1996  170(2)  223-226
Cloning of the rice seed alpha-globulin-encoding gene: sequence similarity of the 5'-flanking region to those of the genes encoding wheat high-molecular-weight glutenin and barley D hordein.
Krishnan,H.B. and Pueppke,S.G.
Biochem. Biophys. Res. Commun. 1993  193(1)  460-466
Nucleotide sequence of an abundant rice seed globulin: homology with the high molecular weight glutelins of wheat, rye and triticale.
Shorrosh,B.S., Wen,L., Zen,K.C., Huang,J.K., Pan,J.S., Hermodson,M.A., Tanaka,K., Muthukrishnan,S. and Reeck,G.R.
Plant Mol. Biol. 1992  18(1)  151-154
A novel cereal storage protein: molecular genetics of the 19 kDa globulin of rice.
TextPresso Search Search textpresso for GLB1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060370
Ontologies
Gene Ontology nutrient reservoir activity( GO:0045735 )
Trait Ontology protein composition related trait( TO:0000490 )
seed maturation( TO:0002661 )
Plant Ontology seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
Jan 13, 2021


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